Upf1 [FBgn0030354]
[zinc ion binding; CG1559; DmUpf1; upf1; Cap-bound mRNA is activated by helicases; Upf1 RNA helicase; enables; NSF-dependent ATP hydrolysis disassembles the cis-SNARE at the TGN; material entity; Exportin-5 recognizes 3’ overhang of pre-miRNA; Upf1p; up-frameshift suppressor 1; double-stranded DNA helicase activity; Upf1; UPF1-LIKE RNA HELICASES; dUPF1; is part of; gene; OTHER DNA HELICASES; smg-2; KCNJ11 tetramer:ABCC8 tetramer binds 4xATP, closing the channel; Dm-Upf1; DNA binding]
Note
This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewerVFB Term Json
{
"term": {
"core": {
"iri": "http://flybase.org/reports/FBgn0030354",
"symbol": "",
"types": [
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"Class",
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],
"short_form": "FBgn0030354",
"label": "Upf1"
},
"description": [],
"comment": []
},
"query": "Get JSON for Class",
"version": "44725ae",
"parents": [
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/SO_0000704",
"types": [
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"short_form": "SO_0000704",
"label": "gene"
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{
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"iri": "http://purl.obolibrary.org/obo/BFO_0000040",
"types": [
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"label": "material entity"
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],
"relationships": [
{
"relation": {
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"label": "is part of",
"type": "part_of"
},
"object": {
"symbol": "",
"iri": "http://flybase.org/reports/FBgg0001588",
"types": [
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"Class"
],
"short_form": "FBgg0001588",
"label": "OTHER DNA HELICASES"
}
},
{
"relation": {
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"label": "is part of",
"type": "part_of"
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"object": {
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"iri": "http://flybase.org/reports/FBgg0001593",
"types": [
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"short_form": "FBgg0001593",
"label": "UPF1-LIKE RNA HELICASES"
}
},
{
"relation": {
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"label": "enables",
"type": "enables"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/GO_0003723",
"types": [
"Entity",
"Class"
],
"short_form": "GO_0003723",
"label": "Exportin-5 recognizes 3' overhang of pre-miRNA"
}
},
{
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"label": "enables",
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"object": {
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"iri": "http://purl.obolibrary.org/obo/GO_0003724",
"types": [
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"short_form": "GO_0003724",
"label": "Cap-bound mRNA is activated by helicases"
}
},
{
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"iri": "http://purl.obolibrary.org/obo/GO_0036121",
"types": [
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"label": "double-stranded DNA helicase activity"
}
},
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"types": [
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],
"short_form": "GO_0016887",
"label": "NSF-dependent ATP hydrolysis disassembles the cis-SNARE at the TGN"
}
},
{
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"object": {
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"types": [
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"short_form": "GO_0003677",
"label": "DNA binding"
}
},
{
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"label": "enables",
"type": "enables"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/GO_0008270",
"types": [
"Entity",
"Class"
],
"short_form": "GO_0008270",
"label": "zinc ion binding"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0002327",
"label": "enables",
"type": "enables"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/GO_0005524",
"types": [
"Entity",
"Class"
],
"short_form": "GO_0005524",
"label": "KCNJ11 tetramer:ABCC8 tetramer binds 4xATP, closing the channel"
}
}
],
"xrefs": [],
"anatomy_channel_image": [],
"pub_syn": [
{
"synonym": {
"scope": "has_exact_synonym",
"label": "Upf1",
"type": ""
},
"pub": {
"core": {
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],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
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"label": "Upf1p",
"type": ""
},
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],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
"scope": "has_exact_synonym",
"label": "DmUpf1",
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},
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"short_form": "Unattributed",
"label": ""
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"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
"scope": "has_exact_synonym",
"label": "dUPF1",
"type": ""
},
"pub": {
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],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
"scope": "has_exact_synonym",
"label": "Upf1 RNA helicase",
"type": ""
},
"pub": {
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"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
"scope": "has_exact_synonym",
"label": "Dm-Upf1",
"type": ""
},
"pub": {
"core": {
"symbol": "",
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],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
"scope": "has_exact_synonym",
"label": "smg-2",
"type": ""
},
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"symbol": "",
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],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
"scope": "has_exact_synonym",
"label": "up-frameshift suppressor 1",
"type": ""
},
"pub": {
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
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],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
"scope": "has_exact_synonym",
"label": "UPF1",
"type": ""
},
"pub": {
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"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
"scope": "has_exact_synonym",
"label": "upf1",
"type": ""
},
"pub": {
"core": {
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],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
"scope": "has_exact_synonym",
"label": "CG1559",
"type": ""
},
"pub": {
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"iri": "http://flybase.org/reports/Unattributed",
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],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
}
],
"def_pubs": []
}
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