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Biological Imaging Methods Ontology
A structured controlled vocabulary of sample preparation, visualization and imaging methods used in biomedical research.
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Ontologies
Biological Imaging Methods Ontology
[14]C
[[14]C; metabolically incorporated radioisotope]
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Ontologies
Biological Imaging Methods Ontology
[3]H
[[3]H; metabolically incorporated radioisotope]
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Ontologies
Biological Imaging Methods Ontology
[32]P
[[32]P; metabolically incorporated radioisotope]
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Ontologies
Biological Imaging Methods Ontology
[32]P labeled DNA probe
[[32]P labeled DNA probe]
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Ontologies
Biological Imaging Methods Ontology
[32]P labeled RNA probe
[[32]P labeled RNA probe]
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Ontologies
Biological Imaging Methods Ontology
[33]P
[metabolically incorporated radioisotope; [33]P]
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Ontologies
Biological Imaging Methods Ontology
[33]P labeled DNA probe
[[33]P labeled DNA probe]
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Ontologies
Biological Imaging Methods Ontology
[33]P labeled RNA probe
[[33]P labeled RNA probe]
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Ontologies
Biological Imaging Methods Ontology
[35]S
[[35]S; metabolically incorporated radioisotope]
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Ontologies
Biological Imaging Methods Ontology
3D-deconvolution
[3D-deconvolution; linear method]
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Ontologies
Biological Imaging Methods Ontology
4\',6-diamidino-2-phenylindole (DAPI)
[membrane impermeant probe; 4',6-diamidino-2-phenylindole (DAPI)]
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Ontologies
Biological Imaging Methods Ontology
5-SFX fluorescein RNA fill
[5-SFX fluorescein RNA fill; fluor labeled RNA fill]
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Ontologies
Biological Imaging Methods Ontology
7-amino-actinomycin D
[membrane impermeant probe; 7-amino-actinomycin D]
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Ontologies
Biological Imaging Methods Ontology
absorption of illumination
[imaged parameter; absorption of illumination]
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Ontologies
Biological Imaging Methods Ontology
AceFP
[AceFP; Green fluorescent proteins from Anthozoa]
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Ontologies
Biological Imaging Methods Ontology
acetone fixed tissue
[coagulating-fixative fixed tissue; acetone fixed tissue]
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Ontologies
Biological Imaging Methods Ontology
acid phosphatase
[enzyme label; acid phosphatase]
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Ontologies
Biological Imaging Methods Ontology
acridine homodimer
[membrane impermeant probe; acridine homodimer]
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Ontologies
Biological Imaging Methods Ontology
acridine orange
[acridine orange; AO; membrane-permeant probe]
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Ontologies
Biological Imaging Methods Ontology
acrolein fixed tissue
[acrolein fixed tissue; coagulating-fixative fixed tissue]
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Ontologies
Biological Imaging Methods Ontology
acrylic painted graphic
[acrylic painted graphic]
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Ontologies
Biological Imaging Methods Ontology
Aequorea victoria red fluorescent protein tag
[RFP; Aequorea victoria red fluorescent protein tag]
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Ontologies
Biological Imaging Methods Ontology
affinity for specific proteins
[probe for protein; affinity for specific proteins]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 350 phalloidin fill
[Alexa Fluor 350 phalloidin fill]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 488
[fluorescent label; Alexa Fluor 488]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 488 actin fill
[Alexa Fluor 488 actin fill]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 488 phalloidin fill
[Alexa Fluor 488 phalloidin fill]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 546
[Alexa Fluor 546; fluorescent label]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 555
[fluorescent label; Alexa Fluor 555]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 568
[fluorescent label; Alexa Fluor 568]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 568 actin fill
[Alexa Fluor 568 actin fill]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 594
[fluorescent label; Alexa Fluor 594]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 610
[Alexa Fluor 610; fluorescent label]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 633
[fluorescent label; Alexa Fluor 633]
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Ontologies
Biological Imaging Methods Ontology
Alexa Fluor 647
[fluorescent label; Alexa Fluor 647]
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Ontologies
Biological Imaging Methods Ontology
alkaline phosphatase
[enzyme label; alkaline phosphatase]
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Ontologies
Biological Imaging Methods Ontology
alpha-bungarotoxin
[non-immunological protein probe; alpha-bungarotoxin]
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Ontologies
Biological Imaging Methods Ontology
AmCyanFP
[AmCyanFP; Cyan fluorescent proteins from Anthozoa]
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Ontologies
Biological Imaging Methods Ontology
aminomethylcoumarin
[AMCA; aminomethylcoumarin; fluorescent label]
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Ontologies
Biological Imaging Methods Ontology
anaxial illumination
Illumination is distributed asymmetrically around the optic axis, typically achieved by a non-circular stop placed below the lower lens element and aperture of the condenser.
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Biological Imaging Methods Ontology
animation
A form of graphical illustration that changes with time to give a sense of motion or represent dynamic changes in the portrayal.
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Ontologies
Biological Imaging Methods Ontology
ANSOM
Aperture-less NSOM.
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Biological Imaging Methods Ontology
antibody
[antibody; macromolecular probe]
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Ontologies
Biological Imaging Methods Ontology
AQ143
[Far-red fluorescent proteins from Anthozoa; AQ143]
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Ontologies
Biological Imaging Methods Ontology
Arachis hypogaea (PNA)
[lectin; Arachis hypogaea (PNA)]
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Ontologies
Biological Imaging Methods Ontology
area detector
[area detector; detection method]
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Biological Imaging Methods Ontology
array scanning
Multiple points of illumination generated by a fixed array of sources.
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Biological Imaging Methods Ontology
array-scan confocal microscopy
Fixed array of sources focused to an array of spots that is swept over the specimen in raster fashion
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Biological Imaging Methods Ontology
AsRed2FP
[AsRed2FP; Red fluorescent proteins from Anthozoa]
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Ontologies
Biological Imaging Methods Ontology
atomic force microscopy
the scanning probe is maintained at a fixed distance above the surface e of the specimen by van der Waals forces
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Biological Imaging Methods Ontology
aurothioglucose
[negative staining; aurothioglucose]
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Biological Imaging Methods Ontology
avalanche photodiode (APD)
[spot detector; avalanche photodiode (APD)]
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Ontologies
Biological Imaging Methods Ontology
Azami GreenFP
[Green fluorescent proteins from Anthozoa; Azami GreenFP]
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Ontologies
Biological Imaging Methods Ontology
AzuriteFP
[AzuriteFP; Blue fluorescent protein from Aequorea victoria]
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Ontologies
Biological Imaging Methods Ontology
back-scattered_electron imaging
imaged formed using electrons undergoing elastic scattering at very high angles, with emission of characteristic X-rays
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Ontologies
Biological Imaging Methods Ontology
batrachatoxin
[affinity for specific proteins; batrachatoxin]
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Ontologies
Biological Imaging Methods Ontology
beta-galactosidase
[lacZ, X-gal; beta-galactosidase; genetically encoded enzyme]
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Ontologies
Biological Imaging Methods Ontology
beta-glucuronidase
[GUS, X-gluc; beta-glucuronidase; genetically encoded enzyme]
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Biological Imaging Methods Ontology
biotin
[fluorescent label; biotin]
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Biological Imaging Methods Ontology
biotin ethylenediamine fill
[miscellaneous fill; biotin ethylenediamine fill; Neurobiotin]
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Ontologies
Biological Imaging Methods Ontology
biotin labeled DNA probe
[biotin labeled DNA probe]
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Ontologies
Biological Imaging Methods Ontology
biotin labeled RNA probe
[biotin labeled RNA probe]
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Biological Imaging Methods Ontology
black and white graphic
[black and white graphic; computer graphic]
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Ontologies
Biological Imaging Methods Ontology
blind deconvolution
[3D-deconvolution; blind deconvolution]
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Ontologies
Biological Imaging Methods Ontology
Blue fluorescent protein from Aequorea victoria
[Blue fluorescent protein from Aequorea victoria; fluorescent protein derived from Aequorea victoria]
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Ontologies
Biological Imaging Methods Ontology
Blue fluorescent proteins from Anthozoa
[fluorescent protein derived from Anthozoa; Blue fluorescent proteins from Anthozoa]
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Ontologies
Biological Imaging Methods Ontology
BODIPY TR-14-dUTP labeled DNA probe
[BODIPY TR-14-dUTP labeled DNA probe]
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Ontologies
Biological Imaging Methods Ontology
botulinum toxin
[botulinum toxin; non-immunological protein probe]
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Ontologies
Biological Imaging Methods Ontology
boundaries between regions with different refractive index
[boundaries between regions with different refractive index; source of contrast]
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Biological Imaging Methods Ontology
bright-field microscopy
[wide-field detection; absorption of illumination; bright-field microscopy; makes_use_of; widefield illumination; light microscopy]
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Ontologies
Biological Imaging Methods Ontology
bromodeoxyuridine labeled DNA probe
[bromodeoxyuridine labeled DNA probe]
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Ontologies
Biological Imaging Methods Ontology
bsDronpa
[bsDronpa; photoswitchable fluorescent protein]
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Ontologies
Biological Imaging Methods Ontology
c-MYC peptide tag
[c-MYC peptide tag; small genetically encoded tag]
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Ontologies
Biological Imaging Methods Ontology
camera lucida assisted graphic
[graphic illustration; camera lucida assisted graphic]
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Ontologies
Biological Imaging Methods Ontology
CARS
coherent Raman anti-Stokes microscopy
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Biological Imaging Methods Ontology
Cascade blue
[fluorescent label; Cascade blue]
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Ontologies
Biological Imaging Methods Ontology
cationic colloidal gold
[cationic colloidal gold; optically-dense stain]
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Ontologies
Biological Imaging Methods Ontology
CeruleanFP
[Cyan fluorescent protein from Aequorea; CeruleanFP]
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Biological Imaging Methods Ontology
charcoal pencil graphic
[charcoal pencil graphic; line art graphic]
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Ontologies
Biological Imaging Methods Ontology
charge coupled device (CCD)
[area detector; charge coupled device (CCD)]
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Ontologies
Biological Imaging Methods Ontology
chemical composition
[imaged parameter; chemical composition]
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Ontologies
Biological Imaging Methods Ontology
chemically fixed tissue
[chemically fixed tissue; fixation method]
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Ontologies
Biological Imaging Methods Ontology
cholera toxin B
[cholera toxin B; lectin]
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Ontologies
Biological Imaging Methods Ontology
CitrineFP
[CitrineFP; Yellow fluorescent protein from Aequorea]
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Ontologies
Biological Imaging Methods Ontology
CMX rosamine (Mitotracker Red)
[Mitotracker X; probe for mitochondria; CMX rosamine (Mitotracker Red)]
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Ontologies
Biological Imaging Methods Ontology
coagulating-fixative fixed tissue
[chemically fixed tissue; coagulating-fixative fixed tissue; solvent permeabilized]
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Ontologies
Biological Imaging Methods Ontology
cobalt fill
[miscellaneous fill; cobalt fill]
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Biological Imaging Methods Ontology
coherent illumination
[coherent illumination; illumination method]
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Biological Imaging Methods Ontology
color graphic
[color graphic; computer graphic]
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Ontologies
Biological Imaging Methods Ontology
colored pencil graphic
[colored pencil graphic; line art graphic]
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Ontologies
Biological Imaging Methods Ontology
compartmentalization of stain or label
[source of contrast; compartmentalization of stain or label]
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Biological Imaging Methods Ontology
complementary metal oxide semiconductor (CMOS)
[area detector; complementary metal oxide semiconductor (CMOS)]
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Biological Imaging Methods Ontology
computational method
[computational method; contrast-enhancing method]
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Biological Imaging Methods Ontology
computed tomography
Tomography in which virtual sections are taken from multiple angles and the results are processed via tomographic reconstruction software to produce 2 or 3D images.
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Ontologies
Biological Imaging Methods Ontology
computer graphic
[graphic illustration; computer graphic]
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Ontologies
Biological Imaging Methods Ontology
conconavalin A
[lectin; conconavalin A]
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Biological Imaging Methods Ontology
confocal microscopy
[confocal microscopy; fluorescence emission; narrow-field detection; makes_use_of; narrowfield illumination; fluorescence microscopy]
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Biological Imaging Methods Ontology
constrained iterative deconvolution
[3D-deconvolution; constrained iterative deconvolution]
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Biological Imaging Methods Ontology
continuous illumination
[illumination method; continuous illumination]
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Biological Imaging Methods Ontology
contrast-enhancing method
[contrast-enhancing method; method involved in biological imaging]
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Biological Imaging Methods Ontology
CopGFP
[Green fluorescent proteins from Anthozoa; CopGFP]
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Biological Imaging Methods Ontology
copper salt
[electron-dense stain; copper salt]
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Biological Imaging Methods Ontology
cresyl fast violet
[cresyl fast violet; optically-dense stain]
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Biological Imaging Methods Ontology
critical_point dried specimen
specimen from which water has been removed by a process that avoids liquid-gas and solid-gas phase transitions.
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Biological Imaging Methods Ontology
crosslinking-fixative fixed tissue
[chemically fixed tissue; crosslinking-fixative fixed tissue]
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Biological Imaging Methods Ontology
cryofixed tissue
[cryofixed tissue; fixation method]
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Biological Imaging Methods Ontology
cryostat-sectioned tissue
[cryostat-sectioned tissue]
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Biological Imaging Methods Ontology
Cy2
[fluorescent label; Cy2]
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Biological Imaging Methods Ontology
Cy3
[Cy3; fluorescent label]
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Biological Imaging Methods Ontology
Cy5
[fluorescent label; Cy5]
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Biological Imaging Methods Ontology
Cyan fluorescent protein from Aequorea
[Cyan fluorescent protein from Aequorea; fluorescent protein derived from Aequorea victoria]
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Biological Imaging Methods Ontology
Cyan fluorescent proteins from Anthozoa
[fluorescent protein derived from Anthozoa; Cyan fluorescent proteins from Anthozoa]
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Biological Imaging Methods Ontology
CyPet
[CyPet; Cyan fluorescent protein from Aequorea]
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Biological Imaging Methods Ontology
dark-field microscopy
imaging with rejection of the unscattered illumination (removal of the zero order component of the diffracted wave)
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Biological Imaging Methods Ontology
darkfield illumination
illumination restricted to angles that exceed the acceptance angle of the image-forming lens
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Biological Imaging Methods Ontology
defocus phase contrast
[optical method; defocus phase contrast]
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Biological Imaging Methods Ontology
Dendra2FP
[photoconvertible fluorescent protein; Dendra2FP]
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Biological Imaging Methods Ontology
dEOSFP
[photoconvertible fluorescent protein; dEOSFP]
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Biological Imaging Methods Ontology
detection method
media and devices employed for recording the alterations in the illumination that result from its interaction with the sample
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Biological Imaging Methods Ontology
detection of acoustic waves
[detection of acoustic waves; detection method]
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Biological Imaging Methods Ontology
detection of current induced in the specimen
[detection method; detection of current induced in the specimen]
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Biological Imaging Methods Ontology
detection of electrons
[detection of electrons; detection method]
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Biological Imaging Methods Ontology
detection of photons
[detection of photons; detection method]
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Biological Imaging Methods Ontology
detection of UV/visible/IR photons
[detection of UV/visible/IR photons; detection of photons]
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Biological Imaging Methods Ontology
detection of X-ray photons
[detection of X-ray photons; detection of photons]
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Biological Imaging Methods Ontology
detergent permeabilized
Membrane permeabilization by the action of ionic or non-ionic detergents
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Biological Imaging Methods Ontology
DiA
[DiA; probe for lipid]
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Biological Imaging Methods Ontology
diagram
[diagram; portrayed image]
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Biological Imaging Methods Ontology
DiD
[probe for lipid; DiD]
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Biological Imaging Methods Ontology
differences in adsorption or binding of stain
[source of contrast; differences in adsorption or binding of stain]
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Biological Imaging Methods Ontology
differences in amount of elastic light scattering
[differences in amount of elastic light scattering; source of contrast]
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Biological Imaging Methods Ontology
differences in chemical composition
[source of contrast; differences in chemical composition]
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Biological Imaging Methods Ontology
differences in deposition of metal shadow
[source of contrast; differences in deposition of metal shadow]
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Biological Imaging Methods Ontology
differences in fluorescence lifetime
[differences in fluorescence lifetime; source of contrast]
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Biological Imaging Methods Ontology
differences in intrinsic optical density
[source of contrast; differences in intrinsic optical density]
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Biological Imaging Methods Ontology
differences in orientation of fluorophore
[source of contrast; differences in orientation of fluorophore]
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Biological Imaging Methods Ontology
differential interference contrast microscopy
[polarized light illumination; polarization-sensitive detection; differential interference contrast microscopy; optical path length gradient; makes_use_of; Nomarski; DIC; Wollaston prism; light microscopy]
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Biological Imaging Methods Ontology
digoxigenin labeled DNA probe
[digoxigenin labeled DNA probe]
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Biological Imaging Methods Ontology
digoxigenin labeled RNA probe
[digoxigenin labeled RNA probe]
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Biological Imaging Methods Ontology
DiI
[DiI; probe for lipid]
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Biological Imaging Methods Ontology
DiIC16
[DiIC16; probe for lipid]
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Biological Imaging Methods Ontology
DiO
[DiO; probe for lipid]
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Biological Imaging Methods Ontology
DiOC6 (3,3'-dihexyloxacarbocyanine iodide)
[DiOC6 (3,3’-dihexyloxacarbocyanine iodide); probe for lipid]
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Biological Imaging Methods Ontology
DiR
[probe for lipid; DiR]
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Biological Imaging Methods Ontology
dispersed cells in vitro
[sample preparation method; dispersed cells in vitro]
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Biological Imaging Methods Ontology
distribution of a specific nucleic acid sequence
[source of contrast; distribution of a specific nucleic acid sequence]
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Biological Imaging Methods Ontology
distribution of a specific protein
[source of contrast; distribution of a specific protein]
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Biological Imaging Methods Ontology
distribution of epitope
[source of contrast; distribution of epitope]
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Biological Imaging Methods Ontology
DNA probe
[DNA probe; sequence-specific nucleic acid probe]
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Biological Imaging Methods Ontology
DOPI (defocussed orientation and position imaging)
[DOPI (defocussed orientation and position imaging); point-localization method]
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Biological Imaging Methods Ontology
Dronpa
[Dronpa; photoswitchable fluorescent protein]
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Biological Imaging Methods Ontology
Dronpa-3
[Dronpa-3; photoswitchable fluorescent protein]
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Biological Imaging Methods Ontology
DsRed
[DsRed; Orange fluorescent proteins from Anthozoa]
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Biological Imaging Methods Ontology
DsRed-ES FP
[DsRed-ES FP; fluorescent protein timer]
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Biological Imaging Methods Ontology
DsRed-Express2FP
[DsRed-Express2FP; Orange fluorescent proteins from Anthozoa]
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Biological Imaging Methods Ontology
DsRed-ExpressFP
[DsRed-ExpressFP; Orange fluorescent proteins from Anthozoa]
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Biological Imaging Methods Ontology
DsRed-MaxFP
[DsRed-MaxFP; Orange fluorescent proteins from Anthozoa]
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Biological Imaging Methods Ontology
DsRed-monomerFP
[DsRed-monomerFP; Orange fluorescent proteins from Anthozoa]
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Biological Imaging Methods Ontology
DsRed2FP
[DsRed2FP; Orange fluorescent proteins from Anthozoa]
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Biological Imaging Methods Ontology
dTomatoFP
[Orange fluorescent proteins from Anthozoa; dTomatoFP]
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Biological Imaging Methods Ontology
dummy term
[dummy term]
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Biological Imaging Methods Ontology
E2GFP
[E2GFP; photoswitchable fluorescent protein]
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Biological Imaging Methods Ontology
EBFP
[EBFP; Blue fluorescent protein from Aequorea victoria]
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Biological Imaging Methods Ontology
ECFP
[ECFP; Cyan fluorescent protein from Aequorea]
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Biological Imaging Methods Ontology
EDAX imaging
[electron microscopy; EDAX imaging]
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Biological Imaging Methods Ontology
EELS imaging
[electron microscopy; ESI electron spectroscopic imaging; EFTEM energy filtered TEM; EELS imaging]
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Biological Imaging Methods Ontology
EGFP
[EGFP; Green fluorescent protein from Aequorea]
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Biological Imaging Methods Ontology
elastic scattering
[elastic scattering; imaged parameter]
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Biological Imaging Methods Ontology
elastic scattering of electrons
[elastic scattering of electrons]
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Biological Imaging Methods Ontology
elastic scattering of photons
[elastic scattering of photons]
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Biological Imaging Methods Ontology
electron bombardment CCD (EBCCD)
[electron bombardment CCD (EBCCD); area detector]
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Biological Imaging Methods Ontology
electron dense label
[electron dense label; vizualization of label conjugated to probe]
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Biological Imaging Methods Ontology
electron density
[imaged parameter; electron density]
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Biological Imaging Methods Ontology
electron microscopy
[mode of electron microscopy; illumination by electrons; makes_use_of; electron microscopy; microscopy with lenses]
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Biological Imaging Methods Ontology
electron multiplying CCD (EMCCD)
[electron multiplying CCD (EMCCD); area detector]
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Biological Imaging Methods Ontology
electron-dense stain
[stain with broad specificity; electron-dense stain]
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Biological Imaging Methods Ontology
elevation
[imaged parameter; elevation]
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Biological Imaging Methods Ontology
embedded tissue
[sample preparation method; embedded tissue]
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Biological Imaging Methods Ontology
EmeraldFP
[EmeraldFP; Green fluorescent protein from Aequorea]
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Biological Imaging Methods Ontology
emission-depletion illumination
[emission-depletion illumination; specimen_modifying_illumination]
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Biological Imaging Methods Ontology
endogenous substrate, acidotropic-fluor conjugate
[LysoTracker; endogenous substrate, acidotropic-fluor conjugate]
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Biological Imaging Methods Ontology
endogenous substrate, diaminobenzidine
[endogenous substrate, diaminobenzidine]
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Biological Imaging Methods Ontology
endogenous substrate, dye conjugate
[endogenous substrate, dye conjugate]
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Biological Imaging Methods Ontology
endogenous substrate, lectin-fluor conjugate
[endogenous substrate, lectin-fluor conjugate]
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Biological Imaging Methods Ontology
endogenous substrate, lectin-gold conjugate
[endogenous substrate, lectin-gold conjugate]
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Biological Imaging Methods Ontology
endogenous substrate, non-vital dye
[endogenous substrate, non-vital dye]
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Biological Imaging Methods Ontology
endogenous substrate, phalloidin-fluor conjugate
[endogenous substrate, phalloidin-fluor conjugate]
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Biological Imaging Methods Ontology
endogenous substrate, vital dye
[endogenous substrate, vital dye]
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Biological Imaging Methods Ontology
enzyme label
[enzyme label; vizualization of label conjugated to probe]
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Biological Imaging Methods Ontology
eosin
Staining with an aqueous or alcoholic solution of eosin Y,colors eosinophilic structures in various shades of red, pink and orange. The eosinophilic structures are generally composed of intracellular or extracellular protein. The Lewy bodies and Mallory bodies are examples of eosinophilic structures. Most of the cytoplasm is eosinophilic. Red blood cells are stained intensely red.
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Releases
Ontologies
Biological Imaging Methods Ontology
eosin phalloidin fill
[eosin phalloidin fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
eqFP611
[Red fluorescent proteins from Anthozoa; eqFP611]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
esterase
[enzyme label; esterase]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
ethanol fixed tissue
[ethanol fixed tissue; coagulating-fixative fixed tissue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
ethidium bromide
[membrane impermeant probe; ethidium bromide]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
ethylene glycol-bis-succinimidyl succinate fixed tissue
[EGS; ethylene glycol-bis-succinimidyl succinate fixed tissue; crosslinking-fixative fixed tissue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
evanescent wave microscopy
[evanescent wave microscopy; total internal reflection fluorescence TIRF; fluorescence microscopy]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
evanescent wave scattering
[FTIR frustrated total internal reflection; dark-field microscopy; evanescent wave scattering]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
exhaustive photon reassignment
[3D-deconvolution; exhaustive photon reassignment]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
exogenous label
[exogenous label]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
EYFP
[Yellow fluorescent protein from Aequorea; EYFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Far-red fluorescent proteins from Anthozoa
[fluorescent protein derived from Anthozoa; Far-red fluorescent proteins from Anthozoa]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
farfield illumination
[farfield illumination; illumination method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Fast-FT
[Fast-FT; fluorescent protein timer]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
film
[area detector; film]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
FIONA (fluorescence imaging with one nanometer accuracy)
[FIONA (fluorescence imaging with one nanometer accuracy); point-localization method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fixation method
[sample preparation method; fixation method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
FLAG peptide tag
[FLAG peptide tag; small genetically encoded tag]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
FLIM
[FLIM; fluorescence microscopy]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
FLIP
Fluorescence loss in photobleaching; a method of determining whether two populations of fluorophore are in diffusive communication with one another by observing the decrease in brightness of one population when the other population is subjected to continuous photobleaching.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluor conjugated actin fill
[fluor labeled protein fill; fluor conjugated actin fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluor conjugated tubulin fill
[fluor labeled protein fill; fluor conjugated tubulin fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluor labeled DNA probe
[fluor labeled DNA probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluor labeled protein fill
[intracellular filling; fluor labeled protein fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluor labeled RNA fill
[intracellular filling; fluor labeled RNA fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Fluorescein (FITC)
[fluorescent label; Fluorescein (FITC)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluoresceine actin fill
[fluoresceine actin fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluoresceine phalloidin fill
[fluoresceine phalloidin fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluoresceine-12-dUTP labeled DNA probe
[fluoresceine-12-dUTP labeled DNA probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluorescence emission
[imaged parameter; fluorescence emission]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluorescence microscopy
[fluorescence emission; UV/visible/IR illumination; makes_use_of; fluorescence microscopy; light microscopy]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluorescence polarization (polarization angle resolved fluorescence emission)
[fluorescence polarization (polarization angle resolved fluorescence emission)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluorescence polarization microscopy
[fluorescence microscopy; fluorescence polarization microscopy]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluorescent dextran fill
[intracellular filling; fluorescent dextran fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluorescent label
[fluorescent label; vizualization of label conjugated to probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluorescent protein derived from Aequorea victoria
[fluorescent protein tag; fluorescent protein derived from Aequorea victoria]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluorescent protein derived from Anthozoa
[fluorescent protein derived from Anthozoa; fluorescent protein tag]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluorescent protein derived from Arabidopsis
[fluorescent protein tag; fluorescent protein derived from Arabidopsis]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluorescent protein tag
[fluorescent protein tag; genetically encoded tag]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluorescent protein timer
[optical highlighter; fluorescent protein timer]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fluoroscein labeled RNA probe
[fluoroscein labeled RNA probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
focussed ion beam scanning electron microscopy (FIB-SEM)
A method of reconstructing 3D structure by combining focussed ion beam milling to remove sucessive layers from a sample block with scanning EM to image the exposed surface between each milling step.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
form birefringence
[source of contrast; form birefringence]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
formaldehyde fixed tissue
[formaldehyde fixed tissue; crosslinking-fixative fixed tissue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
FRAP
Fluorescence loss in photobleaching; a method of determining the rate and extent of exchange between a localized population of fluorophore and a non-localized diffusible pool, by observing the rate of recovery of brightness of the localized population after photobleaching.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
free hand graphic
[free hand graphic; graphic illustration]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
freeze_fracture/freeze_etch
[cryofixed tissue; freeze_fracture/freeze_etch]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
freeze-substituted tissue
[cryofixed tissue; freeze-substituted tissue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
FRET
Fluorescence (or Forster) resonance energy transfer; a method of estimating the distance between two fluorophores by measuring the extent of non-radiative energy transfer between the two. Experimentally, this involves selective excitation of one while observing emission from the other.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
fuchsin
[fuchsin; optically-dense stain]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
gamma ray illumination
[x-ray/gamma ray illumination; gamma ray illumination]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
genetically encoded biotin tag
[genetically encoded biotin tag; small genetically encoded tag]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
genetically encoded enzyme
[genetically encoded enzyme; genetically encoded tag]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
genetically encoded tag
[macromolecular probe; genetically encoded tag]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
giemsa
[giemsa; optically-dense stain]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
glucose oxidase
[enzyme label; glucose oxidase]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
glutaraldehyde fixed tissue
[glutaraldehyde fixed tissue; crosslinking-fixative fixed tissue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
glycerol permeabilized
tissue made permeable by the action of glycerol
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
gold
[gold; electron dense label]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
graphic illustration
[portrayed image; graphic illustration]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
graphite pencil graphic
[graphite pencil graphic; line art graphic]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Green fluorescent protein from Aequorea
[fluorescent protein derived from Aequorea victoria; Green fluorescent protein from Aequorea]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Green fluorescent proteins from Anthozoa
[fluorescent protein derived from Anthozoa; Green fluorescent proteins from Anthozoa]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
grey scale graphic
[grey scale graphic; computer graphic]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
ground state depletion scanning (GSD)
[resolution-enhancing method; ground state depletion scanning (GSD)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
HA peptide tag
[small genetically encoded tag; HA peptide tag]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
hand-sectioned tissue
[hand-sectioned tissue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
HcRed-tandemFP
[Far-red fluorescent proteins from Anthozoa; HcRed-tandemFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
HcRed1FP
[HcRed1FP; Red fluorescent proteins from Anthozoa]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
heat fixed tissue
[heat fixed tissue; fixation method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Helix pomatia agglutinin
[lectin; Helix pomatia agglutinin]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
hematoxylin
The staining method involves application of hemalum, which is a complex formed from aluminium ions and oxidized haematoxylin. This colors nuclei of cells (and a few other objects, such as keratohyalin granules) blue. The staining of nuclei by hemalum does not require the presence of DNA and is probably due to binding of the dye-metal complex to arginine-rich basic nucleoproteins such as histones. The mechanism is different from that of nuclear staining by basic (cationic) dyes such as thionine or toluidine blue. Staining by basic dyes is prevented by chemical or enzymatic extraction of nucleic acids. Such extractions do not prevent staining of nuclei by hemalum.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
high-voltage electron microscopy (HVEM)
[transmission electron microscopy (TEM); high-voltage electron microscopy (HVEM)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Hoechst 33258
[membrane-permeant probe; Hoechst 33258]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Hoechst 33342
[Hoechst 33342; HO342; membrane-permeant probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Hoffman modulation
[modified objective lens; Hoffman modulation]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
hollow-cone illumination
illumination parallel or at small angles to the optical axis is attenuated or blocked by a stop
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
horseradish peroxidase
[enzyme label; horseradish peroxidase]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
illumination by acoustic waves
[illumination by acoustic waves; illumination method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
illumination by electrons
[illumination by electrons; illumination method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
illumination by ions
[illumination method; illumination by ions]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
illumination by neutrons
[illumination method; illumination by neutrons]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
illumination by photons
[illumination by photons; illumination method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
illumination method
sources and methods for illumination
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
imaged parameter
The physical property of the specimen that leads to the modifications of the illumination that are recorded in the image.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
imaging method
[imaging method; method involved in biological imaging]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
in-focus phase contrast
[modified objective lens; in-focus phase contrast]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
incoherent illumination
[incoherent illumination; illumination method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
inelastic scattering
[imaged parameter; inelastic scattering]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
inelastic scattering of electrons
[inelastic scattering of electrons]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
inelastic scattering of photons (Raman scattering)
[inelastic scattering of photons (Raman scattering)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
intensified CCD (ICCD)
[area detector; intensified CCD (ICCD)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
intensified SIT (ISIT)
[intensified SIT (ISIT); area detector]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
interference contrast
[optical method; interference contrast]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
interference reflection contrast (IRM)
[optical method; interference reflection contrast (IRM)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
intermediate voltage electron microacopy (IVEM)
[intermediate voltage electron microacopy (IVEM); transmission electron microscopy (TEM)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
intracellular filling
visualization of the connected regions of a cell by filling with a label
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
intrinsic birefringence
[source of contrast; intrinsic birefringence]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
intrinsic mass distribution
[source of contrast; intrinsic mass distribution]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
IrisFP
[photoconvertible/photoswitchable fluorescent protein; IrisFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
isolated subcellular component
A fragment of a cell, subcellular organelle, or macromolecular complex.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
JRedFP
[Red fluorescent proteins from Anthozoa; JRedFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
KaedeFP
[photoconvertible fluorescent protein; KaedeFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
KatushkaFP
[Far-red fluorescent proteins from Anthozoa; KatushkaFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
KFP1
[photoswitchable fluorescent protein; KFP1]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Kusabira OrangeFP
[Orange fluorescent proteins from Anthozoa; Kusabira OrangeFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Kusabira OrangeFP2
[Orange fluorescent proteins from Anthozoa; Kusabira OrangeFP2]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
labeled nucleic acid probe
[labeled nucleic acid probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
labeled primary antibody
[labeled primary antibody]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
lead salt
[electron-dense stain; lead salt]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
lectin
[lectin; macromolecular probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
light microscopy
[mode of light microscopy; UV/visible/IR illumination; makes_use_of; microscopy with lenses; light microscopy]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
light-sheet illumination
illumination in the form of a thin sheet of light directed perpendicular to the optic axis
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
line art graphic
[graphic illustration; line art graphic]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
linear method
a computational method that is linear in the mathematical sense, meaning that image intensity is conserved and the data remain suitable for all quantitative analyses
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
living tissue
Unfixed fully hydrated tissue, typically employed to monitor dynamic changes in the living state.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
lucifer yellow
[lucifer yellow; miscellaneous fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
lyophilized specimen
specimen from which water has been removed by evaporation under vacuum at a temperature below freezing.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
macromolecular probe
[visualization by chemical attribute; macromolecular probe]
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Releases
Ontologies
Biological Imaging Methods Ontology
macroscopy
methods for imaging objects large enough to be observed by the unaided eye
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mAppleFP
[Red fluorescent proteins from Anthozoa; mAppleFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
maximum likelihood deconvolution
[3D-deconvolution; maximum likelihood deconvolution]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mCherryFP
[Red fluorescent proteins from Anthozoa; mCherryFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mCyFP
[mCyFP; Cyan fluorescent proteins from Anthozoa]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Medium-FT
[Medium-FT; fluorescent protein timer]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
membrane impermeant probe
[membrane impermeant probe; probes for nucleic acid]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
membrane-permeant probe
[probes for nucleic acid; membrane-permeant probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mEOS2FP
[photoconvertible fluorescent protein; mEOS2FP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
metabolically incorporated radioisotope
[visualization by chemical attribute; metabolically incorporated radioisotope]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
methanol fixed tissue
[coagulating-fixative fixed tissue; methanol fixed tissue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
method involved in biological imaging
[method involved in biological imaging]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
methyl green
[membrane impermeant probe; methyl green]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
methyl violet
[methyl violet; optically-dense stain]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
methylene blue
[methylene blue; optically-dense stain]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
microscopy
methods for forming images of objects too small to be observed with the unaided eye
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
microscopy with lenses
[microscopy with lenses]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
microtome-sectioned tissue
[microtome-sectioned tissue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
miniSOG
[phototropin 2; miniSOG]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
miscellaneous fill
[miscellaneous fill; intracellular filling]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mKate2FP
[mKate2FP; Far-red fluorescent proteins from Anthozoa]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mKateFP
[mKateFP; Far-red fluorescent proteins from Anthozoa]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mKikGR
[photoconvertible fluorescent protein; mKikGR]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
modified objective lens
Uses an objective with extra components to manipulate the wave front in the plane of the objective aperture.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
molybdenum compound
[negative staining; molybdenum compound]
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Releases
Ontologies
Biological Imaging Methods Ontology
montage
[portrayed image; montage]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mOrange2FP
[Orange fluorescent proteins from Anthozoa; mOrange2FP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mOrangeFP
[Orange fluorescent proteins from Anthozoa; mOrangeFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mPlumFP
[Far-red fluorescent proteins from Anthozoa; mPlumFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mRasberryFP
[Red fluorescent proteins from Anthozoa; mRasberryFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mRFP1
[Red fluorescent proteins from Anthozoa; mRFP1]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mRubyFP
[Red fluorescent proteins from Anthozoa; mRubyFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mStrawberryFP
[Red fluorescent proteins from Anthozoa; mStrawberryFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mTagBFP
[mTagBFP; Blue fluorescent proteins from Anthozoa]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mTFP0.7
[mTFP0.7; photoswitchable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mTFP1
[mTFP1; Cyan fluorescent proteins from Anthozoa]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
multi-photon microscopy
[fluorescence emission; pulsed illumination; makes_use_of; narrowfield illumination; multi-photon microscopy; fluorescence microscopy]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
multiple point scanning
illumination by multiple points of light simultaneously
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
mWasabiFP
[mWasabiFP; Green fluorescent proteins from Anthozoa]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
narrow field light micrograph
[narrow field light micrograph]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
narrow-field detection
[narrow-field detection; detection method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
narrowfield illumination
illumination restricted to a small portion of the field of view of the imaging lens; often one or more diffraction limited spots
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
nearest-neighbors deblurring
[non-linear method; nearest-neighbors deblurring]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
nearfield illumination
[nearfield illumination; illumination method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
nearfield illumination
[makes_use_of; evanescent wave microscopy; nearfield illumination; illumination method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
nearfield illumination
[makes_use_of; nearfield illumination; illumination method; evanescent wave scattering]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
nearfield scanning optical microscopy (ANSOM)
[nearfield scanning optical microscopy (ANSOM); scanning probe microscopy]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
negative staining
visualization by exclusion of a stain in which the specimen is immersed; compare with “positive staining.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Nile blue A
[Nile blue A; optically-dense stain]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Nile red
[Nile red; probe for lipid]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
nitro blue tetrazolium chloride
[nitro blue tetrazolium chloride; optically-dense stain]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
no-neighbors deblurring
[non-linear method; no-neighbors deblurring]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
non-immunological protein probe
[non-immunological protein probe; macromolecular probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
non-linear method
computational method that are mathematically non-linear; image intensity is not conserved, and the data are in general not suitable for quantitative analyses of pixel values
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
non-specific protein affinity
[probe for protein; non-specific protein affinity]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
nuclear fast red
[optically-dense stain; nuclear fast red]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
oblique illumination
[oblique illumination; illumination method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
OCT
optical coherence tomography; an interferometric method of imaging using back-scattered photons (elastic scattering)
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
oil painted graphic
[oil painted graphic]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
optical highlighter
[optical highlighter; fluorescent protein tag]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
optical method
[optical method; contrast-enhancing method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
optical path length gradient
[imaged parameter; optical path length gradient]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
optically-dense stain
[stain with broad specificity; optically-dense stain]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Orange fluorescent proteins from Anthozoa
[fluorescent protein derived from Anthozoa; Orange fluorescent proteins from Anthozoa]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
orcein
[non-specific protein affinity; orcein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Oregon Green 488 phalloidin fill
[Oregon Green 488 phalloidin fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Oregon Green 488-5-dUTP labeled DNA probe
[Oregon Green 488-5-dUTP labeled DNA probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Oregon Green 514 phalloidin fill
[Oregon Green 514 phalloidin fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Oregon Green 514 tubulin fill
[Oregon Green 514 tubulin fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
organelle-specific probe
[small-molecule probe; organelle-specific probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
orientation-independent polarization microscopy
[orientation-independent polarization microscopy]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
osmium tetroxide
[osmium tetroxide; electron-dense stain]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
osmium tetroxide fixed tissue
[osmium tetroxide fixed tissue; crosslinking-fixative fixed tissue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
other negative stain
[other negative stain; negative staining]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
other radioisotope
[other radioisotope; metabolically incorporated radioisotope]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
PA-CFP
[PA-CFP; photoactivatable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
PA-GFP
[PA-GFP; photoactivatable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
PA-mCherry1FP
[PA-mCherry1FP; photoactivatable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
PA-mRFP
[PA-mRFP; photoactivatable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
PadronFP
[PadronFP; photoswitchable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
PAINT (point accumulation for imaging in nanoscale topography)
[PAINT (point accumulation for imaging in nanoscale topography); point-localization method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
painted graphic
[painted graphic; line art graphic]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
PALM (photoactivation localization microscopy)
[makes_use_of; PALM (photoactivation localization microscopy); point-localization method; photo-activation illumination]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
pastel painted graphic
[pastel painted graphic]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
pen and ink graphic
[black and white graphic; pen and ink graphic; line art graphic]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
peptide-nucleic acid probe
[peptide-nucleic acid probe; sequence-specific nucleic acid probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
permeabilized tissue
Tissue treated to make cell membranes permeable, typically for the purpose of allowing access by exogenous stains or substrates.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
phalloidin
[affinity for specific proteins; phalloidin]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Phamret
[Phamret; photoactivatable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
phase contrast microscopy
[phase contrast microscopy; makes_use_of; refractive index; light microscopy; hollow-cone illumination]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Phaseolus vulgaris lectin PHA-L)
[Phaseolus vulgaris lectin PHA-L)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
PhiYFP
[Yellow fluorescent proteins from Anthozoa; PhiYFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
photo-ablation illumination
[specimen_modifying_illumination; photo-ablation illumination]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
photo-activation illumination
[specimen_modifying_illumination; photo-activation illumination]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
photo-bleaching illumination
[specimen_modifying_illumination; photo-bleaching illumination]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
photo-switching illumination
[specimen_modifying_illumination; photo-switching illumination]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
photoactivatable fluorescent protein
[optical highlighter; photoactivatable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
photoconvertible fluorescent protein
[photoconvertible fluorescent protein; optical highlighter]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
photoconvertible/photoswitchable fluorescent protein
[optical highlighter; photoconvertible/photoswitchable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
photodiode
[photodiode; spot detector]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
photomultiplier tube (PMT)
[photomultiplier tube (PMT); spot detector]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
photoswitchable fluorescent protein
[optical highlighter; photoswitchable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
phototropin 2
[fluorescent protein derived from Arabidopsis; phototropin 2]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
piezo-electric device
[piezo-electric device; spot detector]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
point-localization method
[resolution-enhancing method; point-localization method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
polarization contrast
[optical method; polarization contrast]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
polarization microscopy
[retardance; polarized light illumination; polarization-sensitive detection; makes_use_of; polarization microscopy; light microscopy]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
polarization-sensitive detection
[detection method; polarization-sensitive detection]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
polarized light illumination
[illumination by photons; polarized light illumination]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
portrayed image
methods and devices used for creating images by some form of artwork, as distinct from capturing images by means of some recording device
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
potassium permanganate
[potassium permanganate; electron-dense stain]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody plus labeled secondary antibody
[primary antibody plus labeled secondary antibody]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-alkaline phosphastase conjugate, DAB
[primary antibody-alkaline phosphastase conjugate, DAB]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-alkaline phosphastase conjugate, ELF 97 phosphate
[primary antibody-alkaline phosphastase conjugate, ELF 97 phosphate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-alkaline phosphastase conjugate, Vector Black
[primary antibody-alkaline phosphastase conjugate, Vector Black]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-alkaline phosphastase conjugate, Vector Blue
[primary antibody-alkaline phosphastase conjugate, Vector Blue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-alkaline phosphastase conjugate, Vector Red
[primary antibody-alkaline phosphastase conjugate, Vector Red]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-aminomethylcoumarin acetate
[AMCA; primary antibody-aminomethylcoumarin acetate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-Cascade blue
[primary antibody-Cascade blue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-cyanine
[Cy2; primary antibody-cyanine]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-enzyme conjugate, substrate
[primary antibody-enzyme conjugate, substrate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-fluor conjugate
[primary antibody-fluor conjugate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-fluorescein isothiocyanate
[FITC; primary antibody-fluorescein isothiocyanate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-gold conjugate
[primary antibody-gold conjugate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-horseradish peroxidase, 3-amino-9-ethylcarbazole
[primary antibody-horseradish peroxidase, 3-amino-9-ethylcarbazole]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-horseradish peroxidase, 3,3',5,5'-tetramethylbenzidine
[primary antibody-horseradish peroxidase, 3,3’,5,5’-tetramethylbenzidine]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-horseradish peroxidase, 4-chloro-1-naphthol
[primary antibody-horseradish peroxidase, 4-chloro-1-naphthol]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-horseradish peroxidase, Vector NovaRed
[primary antibody-horseradish peroxidase, Vector NovaRed]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-horseradish peroxidase, Vector SG
[primary antibody-horseradish peroxidase, Vector SG]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-horseradish peroxidase, Vector VIP
[primary antibody-horseradish peroxidase, Vector VIP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-indocarbocyanine
[primary antibody-indocarbocyanine; Cy3]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-indodicarbocyanine
[primary antibody-indodicarbocyanine; Cy5]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-rhodamine red-X
[RRX; primary antibody-rhodamine red-X]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-tetramethyl rhodamine isothiocyanate
[TRITC; primary antibody-tetramethyl rhodamine isothiocyanate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
primary antibody-Texas Red
[primary antibody-Texas Red; TR]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
probe for endoplasmic reticulum
[probe for endoplasmic reticulum; organelle-specific probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
probe for Golgi
[probe for Golgi; organelle-specific probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
probe for lipid
[small-molecule probe; probe for lipid]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
probe for lysosomes
[probe for lysosomes; organelle-specific probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
probe for mitochondria
[probe for mitochondria; organelle-specific probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
probe for protein
[probe for protein; small-molecule probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
probes for nucleic acid
[small-molecule probe; probes for nucleic acid]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
propidium iodide
[membrane impermeant probe; PI; propidium iodide]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
pulsed illumination
illumination that varies with time; often achieved with pulsed lasers for the purpose of generating very-high peak illumination power
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
pyronine
[pyronine; membrane-permeant probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
radiography
An imaging technique that uses high energy electromagnetic radiation, typically X-rays, as a source of illumination.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
radioisotope labeled DNA probe
[radioisotope labeled DNA probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
radioisotope labeled RNA probe
[radioisotope labeled RNA probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
recorded image
methods and devices used for capturing an image of a real object; distinct from images created by artwork
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Red fluorescent proteins from Anthozoa
[Red fluorescent proteins from Anthozoa; fluorescent protein derived from Anthozoa]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
refractive index
[imaged parameter; refractive index]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
resolution-enhancing method
methods for increasing the resolution beyond the classical Abbe diffraction limit
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
retardance
[imaged parameter; retardance]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Rheinberg illumination
illumination at angles less than the acceptance angle of the image-forming lens is attenuated by a filter to give a colored background of unscattered light; higher angle illumination may be filtered to give a contrasting color
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Rhodamine
[Rhodamine; fluorescent label]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
rhodamine 123
[rhodamine 123; probe for mitochondria]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
rhodamine actin fill
[rhodamine actin fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
rhodamine B
[rhodamine B; optically-dense stain]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
rhodamine phalloidin fill
[rhodamine phalloidin fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
RNA probe
[sequence-specific nucleic acid probe; RNA probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
rsCherryFP
[rsCherryFP; photoswitchable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
rsCherryRevFP
[photoswitchable fluorescent protein; rsCherryRevFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
rsFastLimeFP
[rsFastLimeFP; photoswitchable fluorescent protein]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
sample preparation method
[sample preparation method; method involved in biological imaging]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
saponin permeabilized
Saponin, a detergent-like molecule, preferentially forms holes in membranes that contain cholesterol.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
saturated structured-illumination microscopy (SSIM)
structured illumination used at sufficiently high power to cause significant ground-state depletion of the imaged fluorophore, thus allowing for non-linear resolution enhancement
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
scanning electron microscopy (SEM)
image is formed by scanning the surface of the specimen with a beam of electrons in a raster pattern
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
scanning probe microscopy
imaging by means of a physical probe that passes over the sample
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
scanning tunneling microscopy
[scanning tunneling microscopy; scanning probe microscopy]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
scanning-transmission electron microscopy
[scanning-transmission electron microscopy]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
SCFP
[Cyan fluorescent protein from Aequorea; SCFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-Alexa Fluor conjugate
[secondary antibody-Alexa Fluor conjugate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, BCIP
[secondary antibody-alkaline phosphastase conjugate, BCIP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, DAB
[secondary antibody-alkaline phosphastase conjugate, DAB]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, ELF 97 phosphate
[secondary antibody-alkaline phosphastase conjugate, ELF 97 phosphate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, Fast Blue B
[secondary antibody-alkaline phosphastase conjugate, Fast Blue B]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, Fast Red
[secondary antibody-alkaline phosphastase conjugate, Fast Red]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, INT
[secondary antibody-alkaline phosphastase conjugate, INT]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, Magenta Phos
[secondary antibody-alkaline phosphastase conjugate, Magenta Phos]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, NABP
[secondary antibody-alkaline phosphastase conjugate, NABP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, NAGP
[secondary antibody-alkaline phosphastase conjugate, NAGP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, NAMP
[secondary antibody-alkaline phosphastase conjugate, NAMP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, NATP
[secondary antibody-alkaline phosphastase conjugate, NATP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, NBT
[secondary antibody-alkaline phosphastase conjugate, NBT]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, Vector Black
[secondary antibody-alkaline phosphastase conjugate, Vector Black]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, Vector Blue
[secondary antibody-alkaline phosphastase conjugate, Vector Blue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-alkaline phosphastase conjugate, Vector Red
[secondary antibody-alkaline phosphastase conjugate, Vector Red]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-beta-galactosidase, X-Gal
[secondary antibody-beta-galactosidase, X-Gal]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-beta-glucuronidase, X-gluc
[secondary antibody-beta-glucuronidase, X-gluc]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-cyanine conjugate
[Cy2; secondary antibody-cyanine conjugate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-diaminotriazinylaminoflorescein conjugate
[secondary antibody-diaminotriazinylaminoflorescein conjugate; DTAF]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-enzyme conjugate, substrate
[secondary antibody-enzyme conjugate, substrate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-esterase, Naphthol-AS-D-chloroacetate
[secondary antibody-esterase, Naphthol-AS-D-chloroacetate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-fluor conjugate
[secondary antibody-fluor conjugate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-fluorescein isothiocyanate conjugate
[secondary antibody-fluorescein isothiocyanate conjugate; FITC]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-glucose oxidase, TNBT
[secondary antibody-glucose oxidase, TNBT]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-horseradish peroxidase, 3-amino-9-ethylcarbazole
[secondary antibody-horseradish peroxidase, 3-amino-9-ethylcarbazole]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-horseradish peroxidase, 3,3'-diaminobenzidine
[secondary antibody-horseradish peroxidase, 3,3’-diaminobenzidine]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-horseradish peroxidase, 3,3',5,5'-tetramethylbenzidine
[secondary antibody-horseradish peroxidase, 3,3’,5,5’-tetramethylbenzidine]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-horseradish peroxidase, 3,3\'-diaminobenzidine silver enhanced
[secondary antibody-horseradish peroxidase, 3,3'-diaminobenzidine silver enhanced]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-horseradish peroxidase, 4-chloro-1-naphthol
[secondary antibody-horseradish peroxidase, 4-chloro-1-naphthol]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-horseradish peroxidase, Vector NovaRed
[secondary antibody-horseradish peroxidase, Vector NovaRed]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-horseradish peroxidase, Vector SG
[secondary antibody-horseradish peroxidase, Vector SG]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-horseradish peroxidase, Vector VIP
[secondary antibody-horseradish peroxidase, Vector VIP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-indocarbocyanine conjugate
[secondary antibody-indocarbocyanine conjugate; Cy3]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-indodicarbocyanine conjugate
[Cy5; secondary antibody-indodicarbocyanine conjugate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-lissamine rhodamine sulfonyl chloride
[LSRC; secondary antibody-lissamine rhodamine sulfonyl chloride]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-phosphatase, Naphthol-AS-BI-phosphate
[secondary antibody-phosphatase, Naphthol-AS-BI-phosphate]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-rhodamine red-X conjugate
[secondary antibody-rhodamine red-X conjugate; RRX]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-tetramethyl rhodamine isothiocyanate conjugate
[secondary antibody-tetramethyl rhodamine isothiocyanate conjugate; TRITC]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary antibody-Texas red conjugate
[secondary antibody-Texas red conjugate; TR]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary electron generation
electrons generated by inelastic scattering of other radiation, the primary radiation.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
secondary_electron imaging
image created using the electrons generated by ionization of a sample due to inelastic scattering of the primary beam of radiation
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
sectioned tissue
[sample preparation method; sectioned tissue]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
sequence-specific nucleic acid probe
[sequence-specific nucleic acid probe; macromolecular probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
serial block face SEM (SBFSEM)
A method of reconstructing 3D structure by combining serial sectioning with scanning EM.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
shadowing and plating
visualization by depositing a label on the surface of a specimen uniformly (plating), or from a particular direction so that surface topography becomes visible (shadowing)
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
silicon intensified target tube (SIT)
[area detector; silicon intensified target tube (SIT)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
silver-intensified cobalt fill
[silver-intensified cobalt fill]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
single point scanning
illumination by a single spot of light that is scanned across the field of view
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
single sideband edge enhancement (SSBE)
[single sideband edge enhancement (SSBE); modified objective lens]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
single-spot confocal microscopy
[makes_use_of; single-spot confocal microscopy; single point scanning; spot detector]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
SiriusFP
[Blue fluorescent protein from Aequorea victoria; SiriusFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
slit-scan confocal microscopy
illumination and detection via a thin slit
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
slit-scanning illumination
illumination in the shape of a thin line that is swept over the field of view
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
Slow-FT
[fluorescent protein timer; Slow-FT]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
small genetically encoded tag
[small genetically encoded tag]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
small-molecule probe
[small-molecule probe; visualization by chemical attribute]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
solvent permeabilized
permeabilization due to extraction of lipid from membranes by an organic solvent such as acetone or methanol.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
source of contrast
The source of the variation in the imaged parameter across the field of view.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
soybean agglutinin
[soybean agglutinin; lectin]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
specimen_modifying_illumination
Illumination used for the purpose of inducing some observable change in the specimen during the course of an imaging session. This illumination may or may not be the same as the illumination used for imaging. Typically used in conjunction with live-cell imaging
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
SPIM
single (or selective) plane illumination.
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
spinning disk confocal microscopy
[spinning disk confocal microscopy; charge coupled device (CCD); narrow-field detection; makes_use_of; spinning disk scanning]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
spinning disk scanning
scanning by multiple points of light arising from pinholes in a spinning disk that is illuminated by a widefield source
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
spot detector
[spot detector; detection method]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
stain with broad specificity
[small-molecule probe; stain with broad specificity; positive staining]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
stiffness
[stiffness; imaged parameter]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
stimulated emission depletion (STED)
[emission-depletion illumination; resolution-enhancing method; makes_use_of; stimulated emission depletion (STED); narrowfield illumination]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
STORM (stochastic optical reconstruction microscopy)
[makes_use_of; photo-switching illumination; point-localization method; STORM (stochastic optical reconstruction microscopy)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
stress-induced birefringence
[source of contrast; stress-induced birefringence]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
structured illumination microscopy (SIM)
[resolution-enhancing method; structured illumination microscopy (SIM)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
sub-nanosecond time-resolved fluorescence emission)
[sub-nanosecond time-resolved fluorescence emission)]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
SuperfolderFP
[SuperfolderFP; Green fluorescent protein from Aequorea]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
SYFP
[Yellow fluorescent protein from Aequorea; SYFP]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
SYTO Blue
[SYTO Blue; membrane-permeant probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
SYTO Green
[SYTO Green; membrane-permeant probe]
Latest
Releases
Ontologies
Biological Imaging Methods Ontology
SYTO Orange
[SYTO Orange; membrane-permeant probe]