Tag: Entity

_Two-headed cobra (L1EM:19046339) [VFB_00102fkp]

fragments downstream pvl09, det pair, WB_DPLal123 R, *DPLal1-3_r akira, DPLal1-3 ant, DPlal1-3_ant_r akira, downstream of mPN iACT A1 right calyx, ASB TODO B1 right, downstream of mPN iACT B1 right, ASB No Way Out B1 right 21, downstream of handlebar-like, ASB Right PN-LH Input, ASB Downstream of Ipsi Bridges Right, ASB mPN-Dorsal Lobe, ASB PN-Dorsal Lobe, ASB mPN-Dorsal Lobe Connections, li downstream of mPNs everything more than 5 synapses, li temp 5 more with single mPN, li review for mPN right downstream less than 90% more than 5 synapses, li only right side downstream of mPNs everything more than 5 synapses, li shared with Laura, 10 synapse and more, downstream of mPN right, li shared with Laura mPN, ds olfactory mPNs >=5 synapses individual, spitting cobra, mw paired 169, pairs ds olfactory mPNs >=5 synapses individual, potential pairs ds visual PNs >= 5, pairs ds mPNs >= 10, LHNs, axoAxo mPNs, axoDen mPNs, mLHNs, putative LHN, mw brain neurons, mw brain neurons + SU, similarity matrix brain pairs right, similarity matrix brain lineage pairs right, _Two-headed cobra, DPLal1-3 R, mw brain inventory, Srini-Matrix-03-05-2019, mw previously complete, mw right, DPLal1-3 a R, IPL/M, mw axon split complete, mw brain neurons split, #1, mw current paired, mw colored-matrix-2019-09-12, mw brain neurons + sensories, IPL/M, mw brain matrix, mw brain ipsilateral, mw dSEZ feedback 3hop 7-Sept 2020, mw pre-RG feedback 3hop 7-Sept 2020, mw pre-dSEZ feedback 3hop 7-Sept 2020, mw ds-pre-dSEZ, mw dSEZ feedback 3hop 16-Sept 2020, mw pre-dSEZ feedback 3hop 16-Sept 2020, mw brain matrix + A1, lv TOONs minus ORN PNs and KCs 3L_3R_10Sum, lv R TOONs minus ORN PNs and KCs, mw pre-dVNC 1%, mw ipsilateral axon, mw ipsilateral dendrite, mw brain matrix and A1, mw brain paper all neurons, mw pre-dSEZ 1%, mw test matrices, Upstream CN29, mw 10018260 ds contralateral partners, mw 9577562 ds ipsilateral partners, mw 9577562 ds contralateral partners, stable, nr Tel-like 10 downstream 3-hop, mw brain open-ends 3, sw:brain_paired:R, sw;brainpair;R, mw interhemispheric integrator hop-3, mw interhemispheric integration 3-hop, mw gustatory-external 3rd_order, mw olfactory 3rd_order, mw noci 3rd_order, mw thermo-warm 3rd_order, sw;pairs;R, mw dVNC-feedback-3hop 2022-03-15, mw dVNC-feedback-4hop 2022-03-15, mw dVNC-feedback-5hop 2022-03-15, mw dVNC-efference-5hop 2022-03-15, mw dSEZ-feedback-3hop 2022-03-15, mw dSEZ-feedback-4hop 2022-03-15, mw dSEZ-feedback-5hop 2022-03-15, mw dSEZ-efference-3hop 2022-03-15, mw dSEZ-efference-4hop 2022-03-15, mw dSEZ-efference-5hop 2022-03-15, mw dVNC-feedback-casc-8hop 2022-03-15, mw dSEZ-feedback-casc-8hop 2022-03-15, mw dSEZ-efference-casc-8hop 2022-03-15, mw dSEZ-efference-casc-5hop 2022-03-15, remove FB.d, mw FBN-cluster 48_level-7_clusterID-170_walksort-0.540, mw brain and inputs, 0_level-0_clusterID-0_signal-flow_-0.011, 0_level-1_clusterID-2_signal-flow_0.063, 2_level-2_clusterID-6_signal-flow_-0.442, 5_level-3_clusterID-14_signal-flow_-0.319, 11_level-4_clusterID-29_signal-flow_-0.377, 21_level-5_clusterID-59_signal-flow_-0.287, 27_level-6_clusterID-108_signal-flow_0.011, 47_level-7_clusterID-176_signal-flow_0.010, mw cascade-5-hop integrative 2022-11-03, mw cascade-8-hop integrative 2022-11-03, ND_published, ND_all published et al, ctd pre-DN-VNCs, ct pre-DN-SEZs, ct pre-DN-VNCs [EM L1 Winding, Pedigo et al., 2023; transmission electron microscopy (TEM); is part of; embryonic/larval nervous system; L1 larval CNS ssTEM - Cardona/Janelia; embryonic/larval neuron; CC-BY_4.0; _Two-headed cobra (L1EM:19046339); VFB CATMAID L1 CNS]

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_Two-headed cobra (L1EM:2988292) [VFB_00102eii]

WB_DPLal123 L, DPlal1-3_med_l akira, ASB downstream of right mPNs, li downstream of mPNs everything more than 5 synapses, li temp 5 more with single mPN, ASB TODO 8633467, li review for mPN right downstream less than 90% more than 5 synapses, ds olfactory mPNs >=5 synapses individual, no way out 18798880, spitting cobra, mw paired 169, pairs ds olfactory mPNs >=5 synapses individual, potential pairs ds visual PNs >= 5, pairs ds mPNs >= 10, ASB Unresolvable Frag at Gap; Microtubules, LHNs, axoAxo mPNs, axoDen mPNs, mLHNs, putative LHN, mw brain neurons, mw brain neurons + SU, similarity matrix brain pairs left, similarity matrix brain lineage pairs left, _Two-headed cobra, mw brain inventory, Srini-Matrix-03-05-2019, mw previously complete, mw left, DPLal1-3 L, IPL/M, DPLal1-3 a L, mw axon split complete, mw brain neurons split, #1T, mw current paired, AUTO ascending neurons, mw colored-matrix-2019-09-12, mw brain neurons + sensories, IPL/M, mw brain matrix, mw brain ipsilateral, mw dSEZ feedback 3hop 7-Sept 2020, mw pre-dSEZ feedback 3hop 7-Sept 2020, mw ds-pre-dSEZ, mw dSEZ feedback 3hop 16-Sept 2020, mw pre-dSEZ feedback 3hop 16-Sept 2020, mw brain matrix + A1, lv TOONs minus ORN PNs and KCs 3L_3R_10Sum, lv L TOONs minus ORN PNs and KCs, lv R TOONs minus ORN PNs and KCs, mw pre-dVNC 1%, mw ipsilateral axon, mw ipsilateral dendrite, mw degree 30-40, mw brain matrix and A1, mw brain paper all neurons, mw pre-dSEZ 1%, mw test matrices, Upstream CN29, mw 10018260 ds contralateral partners, mw 9577562 ds ipsilateral partners, mw 9577562 ds contralateral partners, stable, nr Tel-like 10 downstream 3-hop, sw:brain_paired:L, sw;brainpair;L, mw gustatory-external 3rd_order, mw olfactory 3rd_order, mw noci 3rd_order, mw thermo-warm 3rd_order, downFB, mw interhemispheric integration 2-hop, sw;pairs;L, mw dVNC-feedback-3hop 2022-03-15, mw dVNC-feedback-4hop 2022-03-15, mw dVNC-feedback-5hop 2022-03-15, mw dVNC-efference-5hop 2022-03-15, mw dSEZ-feedback-3hop 2022-03-15, mw dSEZ-feedback-4hop 2022-03-15, mw dSEZ-feedback-5hop 2022-03-15, mw dSEZ-efference-3hop 2022-03-15, mw dSEZ-efference-4hop 2022-03-15, mw dSEZ-efference-5hop 2022-03-15, mw dVNC-feedback-casc-8hop 2022-03-15, mw dSEZ-feedback-casc-8hop 2022-03-15, mw dSEZ-efference-casc-8hop 2022-03-15, mw dSEZ-efference-casc-5hop 2022-03-15, remove FB.d, mw FBN-cluster 48_level-7_clusterID-170_walksort-0.540, mw brain and inputs, 0_level-0_clusterID-0_signal-flow_-0.011, 0_level-1_clusterID-2_signal-flow_0.063, 2_level-2_clusterID-6_signal-flow_-0.442, 5_level-3_clusterID-14_signal-flow_-0.319, 11_level-4_clusterID-29_signal-flow_-0.377, 21_level-5_clusterID-59_signal-flow_-0.287, 27_level-6_clusterID-108_signal-flow_0.011, 47_level-7_clusterID-176_signal-flow_0.010, mw cascade-5-hop integrative 2022-11-03, mw cascade-8-hop integrative 2022-11-03, ND_published, ND_all published et al, ctd pre-DN-VNCs, ct pre-DN-SEZs, ct pre-DN-VNCs [EM L1 Winding, Pedigo et al., 2023; transmission electron microscopy (TEM); VFB CATMAID L1 CNS; is part of; embryonic/larval nervous system; L1 larval CNS ssTEM - Cardona/Janelia; embryonic/larval neuron; CC-BY_4.0; _Two-headed cobra (L1EM:2988292)]

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((1,6)-alpha-glucosyl)poly((1,4)-alpha-glucosyl)glycogenin => poly{(1,4)-alpha-glucosyl} glycogenin + alpha-D-glucose [GO_0004135]

Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the (1->6) glycosidic linkages present.

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[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity [GO_0008467]

Catalysis of the reaction: 3’-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3’,5’-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate. The [heparan sulfate]-glucosamine 3-sulfate has a substrate consensus sequence of Glc(N2S>NAc)+/-6S GlcA GlcN2S*+/-6S GlcA>IdoA+/-2S Glc(N2S/NAc)+/-6S.

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1-PP-IP5 is phosphorylated to 1,5-(PP)2-IP4 by IP6K1/3 in the cytosol [GO_0000829]

Catalysis of the reaction: ATP + diphospho-1D-myo-inositol-pentakisphosphate = ADP + bis(diphospho)-1D-myo-inositol-tetrakisphosphate. The isomeric configurations of the diphospho-1D-myo-inositol-pentakisphosphate (PP-IP5) and bis(diphospho)-1D-myo-inositol-tetrakisphosphate (bis-PP-IP4) are unknown.

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130729_SFO Cand 42a-42b_OSN_IN1 left (L1EM:3486867) [VFB_00102ej6]

Interneurons_Lobe1, IN_Searching for other 42a-42b, GPhN need partners, unfinished GPhN, paired with #5478818, WB_BAmas L, BAmas12_dor_l akira, downstream of AN-B2, DSB2A, downstream of SCAN2A, downstream of SCAN3A, upstream PI, hemilateral_pair_3486867_5478818, mw brain neurons, preANmotor, mw brain neurons + SU, AN_premotor_AS, mw brain inventory, upstream PMNs, upstream MN motor, mw previously complete, mw left, BAmas1/2 L, mw axon split complete, TR, mw brain neurons split, MxN motor upstream, AUTO descending neurons to SEZ, mw colored-matrix-2019-09-12, #17T, mw brain neurons + sensories, mw dSEZ, test1, hugintopmn, hugintopmnleft, mw brain matrix, Pankratz pre, mw AN_MN 2nd_order, mw ORN_AN_MN 2nd_order, mw brain ipsilateral, mw brain matrix + A1, FOR21, FOR21_inter, mw bilateral axon, mw ipsilateral dendrite, mw SEZ-center dendrite, mw betweenness_centrality >0.1, mw brain matrix and A1, mw brain paper all neurons, path2_FOR, allinter_FOR, P01_FOR, mw test matrices, stable, mw pre-dSEZ, mw partner loops, mw 3486867 upstream partners, mw 3486867 downstream partners, PL-1, TR, sw:brain_paired:L, sw;brainpair;L, mw gustatory-external 2nd_order, mw gustatory-pharyngeal 2nd_order, sw;pairs;L, mw dSEZ-efference-1hop 2022-03-15, mw dSEZ-efference-2hop 2022-03-15, mw dSEZ-efference-3hop 2022-03-15, mw brain and inputs, 0_level-0_clusterID-0_signal-flow_-0.011, 1_level-1_clusterID-1_signal-flow_-0.067, 0_level-2_clusterID-4_signal-flow_0.888, 2_level-3_clusterID-10_signal-flow_0.795, 3_level-4_clusterID-21_signal-flow_0.855, 7_level-5_clusterID-44_signal-flow_0.826, 3_level-6_clusterID-86_signal-flow_1.332, 5_level-7_clusterID-147_signal-flow_1.320, RGPNs_upstream_AM, mw cascade-5-hop integrative 2022-11-03, mw cascade-8-hop integrative 2022-11-03, ND_published, ND_all published et al, ctd DN-SEZs, ct pre-DN-SEZs, ct DN-SEZs [EM L1 Winding, Pedigo et al., 2023; transmission electron microscopy (TEM); 130729_SFO Cand 42a-42b_OSN_IN1 left (L1EM:3486867); is part of; embryonic/larval nervous system; L1 larval CNS ssTEM - Cardona/Janelia; embryonic/larval neuron; CC-BY_4.0; VFB CATMAID L1 CNS]

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130729_SFO Cand 42a-42b_OSN_IN1 right (L1EM:5478818) [VFB_00102elw]

paired with #3486867, SOG neurons, WB_BAmas R, BAmas12_dor_r akira, downstream of AN-B2, downstream of AN-B1, DSB2A, downstream of B1 and B2, downstream of SCAN2A, hemilateral_pair_3486867_5478818, mw brain neurons, mw brain neurons + SU, mw brain inventory, upstream MN motor, mw right, TR, mw axon split complete, mw brain neurons split, mw draft complete, MxN motor upstream, mw colored-matrix-2019-09-12, #17, BAmas1/2 R, mw brain neurons + sensories, mw dSEZ, test1, mw brain matrix, Pankratz pre, mw brain unpublished <80% reviewed 2020-04-24, mw AN_MN 2nd_order, mw ORN_AN_MN 2nd_order, mw brain ipsilateral, mw brain matrix + A1, FOR21, FOR21_inter, mw bilateral axon, mw ipsilateral dendrite, mw SEZ-center dendrite, mw brain matrix and A1, mw brain paper all neurons, path1_FOR, allinter_FOR, P01_FOR, mw test matrices, stable, mw pre-dSEZ, mw partner loops, mw 3486867 upstream partners, mw 3486867 downstream partners, PL-1, TR, mw brain reviewed <80%, sw:brain_paired:R, sw;brainpair;R, mw gustatory-external 2nd_order, mw gustatory-pharyngeal 2nd_order, sw;pairs;R, mw dSEZ-efference-1hop 2022-03-15, mw dSEZ-efference-2hop 2022-03-15, mw dSEZ-efference-3hop 2022-03-15, mw brain and inputs, 0_level-0_clusterID-0_signal-flow_-0.011, 1_level-1_clusterID-1_signal-flow_-0.067, 0_level-2_clusterID-4_signal-flow_0.888, 2_level-3_clusterID-10_signal-flow_0.795, 3_level-4_clusterID-21_signal-flow_0.855, 7_level-5_clusterID-44_signal-flow_0.826, 3_level-6_clusterID-86_signal-flow_1.332, 5_level-7_clusterID-147_signal-flow_1.320, mw cascade-5-hop integrative 2022-11-03, mw cascade-8-hop integrative 2022-11-03, clb brainpaircensus mw right, ND_published, ND_all published et al, ctd DN-SEZs, ct pre-DN-SEZs, ct DN-SEZs [130729_SFO Cand 42a-42b_OSN_IN1 right (L1EM:5478818); EM L1 Winding, Pedigo et al., 2023; transmission electron microscopy (TEM); is part of; embryonic/larval nervous system; L1 larval CNS ssTEM - Cardona/Janelia; embryonic/larval neuron; CC-BY_4.0; VFB CATMAID L1 CNS]

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14-3-3 protein binding [GO_0071889]

Binding to a 14-3-3 protein. A 14-3-3 protein is any of a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimers within all eukaryotic cells, and have been implicated in the modulation of distinct biological processes by binding to specific phosphorylated sites on diverse target proteins, thereby forcing conformational changes or influencing interactions between their targets and other molecules. Each 14-3-3 protein sequence can be roughly divided into three sections: a divergent amino terminus, the conserved core region and a divergent carboxy-terminus. The conserved middle core region of the 14-3-3s encodes an amphipathic groove that forms the main functional domain, a cradle for interacting with client proteins.

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14-3-3ε [FBgn0020238]

[Eps; PAR5; 14-3-3 PROTEINS; Par-5; par-5; 1433epsilon; 14-3-3 epsilon; D14-3-3epsilon; PAR-5; Su(Raf)3B; enables; 14-3-3-ε; material entity; CG31196; SR3-9; d14-3-3epsilon; Suppressor of Ras85D 3-9; CT24092; 14.3.3 epsilon; d14-3-3ε; Epsilon; 14-3-3ε l(3)j2B10; e-14-3-3; protein heterodimerization activity; 14-3-3-e; 14-3-3EPSILON; anon-WO0172774.141; 14-3-3 ε; 14-3-30ε; 1433ε; 14-3-3 protein epsilon; 14-3-3-epsilon; Tyrosine-3-monooxygenase; is part of; gene; D14-3-3ε; EK3-5; Positive Regulators of Hippo Signaling Pathway; 143E_DROME; phosphoserine residue binding; 14-3-30epsilon; 14-3-3ε; transcription factor binding; 14-3-3omicron; anon-WO02059370.52; 14-3-3ο]

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14-3-3ζ [FBgn0004907]

[PAR5; 14-3-3 PROTEINS; Par-5; par-5; 14-3-3leo; 1433Z; D14-3-3zeta; 14-3-3ζ; LEONARDO; PAR-5; 14-3-3-Leo; enables; material entity; 14.3.3; 14-3-3 zeta; 14-3-3 ζ; Complementation group K; BEST:GH05075; Leonardo-13-3-3; protein heterodimerization activity; Positive Regulators of Torso Signaling Pathway; 2G1; CG17870; 5.11; l(2)46Ee; l(2)07103; leonardo 14-3-3; D14 3 3 protein; 4-3-3 zeta; D14-3-3ζ; l(2)46CFe; 549; is part of; gene; Positive Regulators of Hippo Signaling Pathway; 14-3-3-zeta; d14-3-3zeta; transcription factor binding; 14-3-3ZETA; protein homodimerization activity; leonardo]

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2-2I of thorax [FBbt_00001470]

Primary interneuron that develops from NB2-1 of the thorax. These neurons form a fascicle of about 10 axons that projects contralaterally through the anterior commissure. Unlike the 2-2I of abdomen, the 2-2I fascicle of thorax does not turn anteriorly after reaching the contralateral connective. See Bossing et al., (1996) for a diagram.

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2-iminobutanoate/2-iminopropanoate deaminase [GO_0120241]

Catalyzes the hydrolytic deamination of imine intermediates formed by several types of pyridoxal-5’-phosphate-dependent dehydratases, such as EC 4.3.1.19 and EC 4.3.1.17. This enzyme, which has been found in all species and tissues examined, catalyzes the hydrolytic deamination of imine intermediates formed by several types of pyridoxal-5’-phosphate-dependent dehydratases, such as EC 4.3.1.19 and EC 4.3.1.17. The reactions, which can occur spontaneously, are accelerated to minimize the cellular damage that could be caused by these reactive intermediates (from EC:3.5.99.10).

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