EM FAFB Bates and Schlegel et al 2020 [BatesSchlegel2020]

FAFB EM reconstructed neurons from Bates and Schlegel et al 2020

Open EM FAFB Bates and Schlegel et al 2020 in VFB

Example Images

EM FAFB Bates and Schlegel et al 2020 EM FAFB Bates and Schlegel et al 2020 EM FAFB Bates and Schlegel et al 2020 EM FAFB Bates and Schlegel et al 2020

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://virtualflybrain.org/data/BatesSchlegel2020",
            "symbol": "",
            "types": [
                "Entity",
                "DataSet",
                "Individual"
            ],
            "short_form": "BatesSchlegel2020",
            "label": "EM FAFB Bates and Schlegel et al 2020"
        },
        "link": "",
        "description": [
            "FAFB EM reconstructed neurons from Bates and Schlegel et al 2020"
        ],
        "comment": []
    },
    "query": "Get JSON for DataSet",
    "version": "44725ae",
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_001012ab",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Cholinergic",
                    "Individual",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_001012ab",
                "label": "Uniglomerular mALT DL2v adPN#L4 (FAFB:12202021)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/12ab/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_001012ab",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_001012ab",
                    "label": "Uniglomerular mALT DL2v adPN#L4 (skeleton_id:12202021)_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_001011te",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_001011te",
                "label": "Uniglomerular lALT VP2 l2PN#R1 (FAFB:5672990)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/11te/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_001011te",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_001011te",
                    "label": "Uniglomerular lALT VP2 l2PN#R1 (skeleton_id:5672990)_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_0010121l",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "GABAergic",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_0010121l",
                "label": "Uniglomerular mlALT VL2p vPN#R1 (FAFB:1702624)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/121l/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_0010121l",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_0010121l",
                    "label": "Uniglomerular mlALT VL2p vPN#R1 (skeleton_id:1702624)_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00101344",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_00101344",
                "label": "LHPV4a5#1 (FAFB:4215506)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/1344/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00101344",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_00101344",
                    "label": "PV4a4#1_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00101344",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_00101344",
                "label": "LHPV4a5#1 (FAFB:4215506)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00017894",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template",
                            "VFB"
                        ],
                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00017894",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "VFB",
                            "has_image"
                        ],
                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/1344/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00101344",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_00101344",
                    "label": "PV4a4#1_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        }
    ],
    "xrefs": [],
    "license": [
        {
            "core": {
                "symbol": "",
                "iri": null,
                "types": null,
                "short_form": null,
                "label": ""
            },
            "icon": "",
            "link": ""
        }
    ],
    "pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "https://doi.org/10.1016/j.cub.2020.06.042",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "doi_10_1016_j_cub_2020_06_042",
                "label": "Bates and Schlegel et al., 2020"
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": "10.1016/j.cub.2020.06.042"
        }
    ],
    "dataset_counts": {
        "images": 454,
        "types": 191
    }
}