alpha/beta surface Kenyon cell [FBbt_00110930]

Alpha/beta mushroom body neuron that has dendrites in the main calyx and projects axons to the surface layer of the alpha and beta lobes, where they form a continuous layer surrounding the alpha/beta core (Aso et al., 2014). There are around 500 of these neurons in each hemisphere (Aso et al., 2014; Takemura et al., 2017). Li et al.(2020) - FlyBase:FBrf0248215 only class ~220 cells as surface, rest likely to be ‘middle’ group.

Open alpha/beta surface Kenyon cell in VFB

Example Images

alpha/beta surface Kenyon cell alpha/beta surface Kenyon cell alpha/beta surface Kenyon cell alpha/beta surface Kenyon cell alpha/beta surface Kenyon cell

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/FBbt_00110930",
            "symbol": "KCab-s",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Cholinergic",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00110930",
            "label": "alpha/beta surface Kenyon cell"
        },
        "description": [
            "Alpha/beta mushroom body neuron that has dendrites in the main calyx and projects axons to the surface layer of the alpha and beta lobes, where they form a continuous layer surrounding the alpha/beta core (Aso et al., 2014). There are around 500 of these neurons in each hemisphere (Aso et al., 2014; Takemura et al., 2017)."
        ],
        "comment": [
            "Li et al.(2020) - FlyBase:FBrf0248215 only class ~220 cells as surface, rest likely to be 'middle' group."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00049838",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Cholinergic",
                "Class",
                "Nervous_system",
                "Neuron"
            ],
            "short_form": "FBbt_00049838",
            "label": "alpha/beta surface/core Kenyon cell"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013003",
                "label": "sends_synaptic_output_to_region",
                "type": "sends_synaptic_output_to_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00100257",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00100257",
                "label": "mushroom body alpha lobe surface layer"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013003",
                "label": "sends_synaptic_output_to_region",
                "type": "sends_synaptic_output_to_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00100262",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain"
                ],
                "short_form": "FBbt_00100262",
                "label": "mushroom body beta lobe surface layer"
            }
        }
    ],
    "xrefs": [
        {
            "link_base": "https://flybrain-ndb.virtualflybrain.org/neuronrec-",
            "site": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/FlyBrain_NDB",
                "types": [
                    "Entity",
                    "Individual",
                    "Site"
                ],
                "short_form": "FlyBrain_NDB",
                "label": "FlyBrain NeuronDB"
            },
            "is_data_source": false,
            "link_postfix": [
                ".html"
            ],
            "icon": "http://flybrain-ndb.virtualflybrain.org/NDB_title260.gif",
            "accession": "10478",
            "link_text": "alpha/beta surface Kenyon cell on FlyBrain NeuronDB",
            "homepage": "https://flybrain-ndb.virtualflybrain.org"
        }
    ],
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchjvty",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Cholinergic",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity",
                    "has_region_connectivity"
                ],
                "short_form": "VFB_jrchjvty",
                "label": "KCab-s_R (FlyEM-HB:5813020831)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/jvty/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_jrchjvty",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_jrchjvty",
                    "label": "KCab-s_R - 5813020831_c"
                },
                "imaging_technique": {
                    "symbol": "FIB-SEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00050000",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchjvty",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Cholinergic",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity",
                    "has_region_connectivity"
                ],
                "short_form": "VFB_jrchjvty",
                "label": "KCab-s_R (FlyEM-HB:5813020831)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101384",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101384",
                        "label": "JRC_FlyEM_Hemibrain_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101384",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101384",
                        "label": "JRC_FlyEM_Hemibrain"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/jvty/VFB_00101384/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_jrchjvty",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_jrchjvty",
                    "label": "KCab-s_R - 5813020831_c"
                },
                "imaging_technique": {
                    "symbol": "FIB-SEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00050000",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00013141",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Cholinergic",
                    "Expression_pattern_fragment",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "VFB",
                    "has_image",
                    "NBLASTexp"
                ],
                "short_form": "VFB_00013141",
                "label": "VGlut-F-600143"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00017894",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template",
                            "VFB"
                        ],
                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00017894",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "VFB",
                            "has_image"
                        ],
                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0001/3141/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00013141",
                    "types": [
                        "Entity",
                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00013141",
                    "label": "VGlut-F-600143-c"
                },
                "imaging_technique": {
                    "symbol": "Confocal",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000251",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000251",
                    "label": "confocal microscopy"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00013141",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Cholinergic",
                    "Expression_pattern_fragment",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "VFB",
                    "has_image",
                    "NBLASTexp"
                ],
                "short_form": "VFB_00013141",
                "label": "VGlut-F-600143"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0001/3141/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00013141",
                    "types": [
                        "Entity",
                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00013141",
                    "label": "VGlut-F-600143-c"
                },
                "imaging_technique": {
                    "symbol": "Confocal",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000251",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000251",
                    "label": "confocal microscopy"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_jrchjvy3",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Cholinergic",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity",
                    "has_region_connectivity"
                ],
                "short_form": "VFB_jrchjvy3",
                "label": "KCab-s_R (FlyEM-HB:939734122)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/jrch/jvy3/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_jrchjvy3",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_jrchjvy3",
                    "label": "KCab-s_R - 939734122_c"
                },
                "imaging_technique": {
                    "symbol": "FIB-SEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00050000",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00050000",
                    "label": "focussed ion beam scanning electron microscopy (FIB-SEM)"
                }
            }
        }
    ],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "alpha/beta surface KC",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "Unattributed",
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "alpha/betas",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/FBrf0227179",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "FBrf0227179",
                    "label": "Aso et al., 2014, eLife 3: e04577"
                },
                "FlyBase": "FBrf0227179",
                "PubMed": "25535793",
                "DOI": "10.7554/eLife.04577"
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "alpha/beta s Kenyon cell",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/FBrf0227179",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "FBrf0227179",
                    "label": "Aso et al., 2014, eLife 3: e04577"
                },
                "FlyBase": "FBrf0227179",
                "PubMed": "25535793",
                "DOI": "10.7554/eLife.04577"
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "mushroom body alpha/beta surface neuron",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "Unattributed",
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "alpha/beta s KC",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "Unattributed",
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "alpha/beta surface neuron",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "Unattributed",
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "Kenyon cells (alpha/beta lobe surface)",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "Unattributed",
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "KCab-s",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/FBrf0246888",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "FBrf0246888",
                    "label": "Scheffer et al., 2020, eLife 9: e57443"
                },
                "FlyBase": "",
                "PubMed": "32880371",
                "DOI": "10.7554/eLife.57443"
            }
        }
    ],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0162233",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0162233",
                "label": "Strausfeld et al., 2003, Microsc. Res. Tech. 62(2): 151--169"
            },
            "FlyBase": "",
            "PubMed": "12966500",
            "DOI": "10.1002/jemt.10368"
        },
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0174482",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0174482",
                "label": "Tanaka et al., 2004, Curr. Biol. 14(6): 449--457"
            },
            "FlyBase": "",
            "PubMed": "15043809",
            "DOI": "10.1016/j.cub.2004.03.006"
        },
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0227179",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0227179",
                "label": "Aso et al., 2014, eLife 3: e04577"
            },
            "FlyBase": "FBrf0227179",
            "PubMed": "25535793",
            "DOI": "10.7554/eLife.04577"
        }
    ]
}