adult MeMe_e13 neuron [FBbt_20004334]

Adult optic-lobe-intrinsic neuron with its soma in the brain, ventral to the lateral horn. It has postsynapses in the ipsilateral medulla. It has presynapses in the contralateral medulla, the ipsilateral medulla and the contralateral lobula. Its predicted neurotransmitter is acetylcholine. Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).

Open adult MeMe_e13 neuron in VFB

Term Information

  • ID: FBbt_20004334
  • Name: adult MeMe_e13 neuron
  • Definition: Adult optic-lobe-intrinsic neuron with its soma in the brain, ventral to the lateral horn. It has postsynapses in the ipsilateral medulla. It has presynapses in the contralateral medulla, the ipsilateral medulla and the contralateral lobula. Its predicted neurotransmitter is acetylcholine.
  • Synonyms:
  • Type:
  • Comment: Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/FBbt_20004334",
            "symbol": "MeMe_e13",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Cholinergic",
                "Class",
                "Nervous_system",
                "Neuron",
                "Visual_system"
            ],
            "short_form": "FBbt_20004334",
            "unique_facets": [
                "Adult",
                "Cholinergic",
                "Nervous_system",
                "Visual_system"
            ],
            "label": "adult MeMe_e13 neuron"
        },
        "description": [
            "Adult optic-lobe-intrinsic neuron with its soma in the brain, ventral to the lateral horn. It has postsynapses in the ipsilateral medulla. It has presynapses in the contralateral medulla, the ipsilateral medulla and the contralateral lobula. Its predicted neurotransmitter is acetylcholine."
        ],
        "comment": [
            "Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023)."
        ]
    },
    "query": "Get JSON for Class",
    "version": "08f7a30",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00001366",
            "types": [
                "Entity",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron",
                "has_subClass",
                "hasScRNAseq"
            ],
            "short_form": "FBbt_00001366",
            "unique_facets": [
                "Nervous_system",
                "Neuron"
            ],
            "label": "supraesophageal ganglion neuron"
        },
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00047736",
            "types": [
                "Entity",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron",
                "Visual_system",
                "has_subClass",
                "hasScRNAseq"
            ],
            "short_form": "FBbt_00047736",
            "unique_facets": [
                "Nervous_system",
                "Neuron",
                "Visual_system"
            ],
            "label": "visual system neuron"
        },
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00052046",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron",
                "has_subClass",
                "hasScRNAseq"
            ],
            "short_form": "FBbt_00052046",
            "unique_facets": [
                "Adult",
                "Nervous_system",
                "Neuron"
            ],
            "label": "adult interneuron"
        },
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00058205",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Cholinergic",
                "Class",
                "Nervous_system",
                "Neuron",
                "has_subClass",
                "hasScRNAseq"
            ],
            "short_form": "FBbt_00058205",
            "unique_facets": [
                "Adult",
                "Cholinergic",
                "Nervous_system"
            ],
            "label": "adult cholinergic neuron"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013003",
                "label": "sends synaptic output to region",
                "type": "sends_synaptic_output_to_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003748",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain",
                    "Visual_system"
                ],
                "short_form": "FBbt_00003748",
                "unique_facets": [
                    "Adult",
                    "Nervous_system",
                    "Synaptic_neuropil_domain",
                    "Visual_system"
                ],
                "label": "medulla"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013003",
                "label": "sends synaptic output to region",
                "type": "sends_synaptic_output_to_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003852",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain",
                    "Visual_system"
                ],
                "short_form": "FBbt_00003852",
                "unique_facets": [
                    "Adult",
                    "Nervous_system",
                    "Synaptic_neuropil_domain",
                    "Visual_system"
                ],
                "label": "lobula"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013002",
                "label": "receives synaptic input in region",
                "type": "receives_synaptic_input_in_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003748",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain",
                    "Visual_system"
                ],
                "short_form": "FBbt_00003748",
                "unique_facets": [
                    "Adult",
                    "Nervous_system",
                    "Synaptic_neuropil_domain",
                    "Visual_system"
                ],
                "label": "medulla"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0002100",
                "label": "has soma location",
                "type": "has_soma_location"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00007647",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system"
                ],
                "short_form": "FBbt_00007647",
                "unique_facets": [
                    "Adult",
                    "Nervous_system"
                ],
                "label": "cell body rind of adult lateral horn"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0000053",
                "label": "bearer of",
                "type": "bearer_of"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/PATO_0000618",
                "types": [
                    "Entity",
                    "Class"
                ],
                "short_form": "PATO_0000618",
                "unique_facets": [
                    "Class"
                ],
                "label": "bilateral"
            }
        }
    ],
    "xrefs": [],
    "anatomy_channel_image": [],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "CB0592",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "Unattributed",
                    "unique_facets": [
                        "pub"
                    ],
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        }
    ],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/Unattributed",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "Unattributed",
                "unique_facets": [
                    "pub"
                ],
                "label": ""
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": ""
        }
    ]
}