adult MeMe_e10 neuron [FBbt_20004126]

Adult optic-lobe-intrinsic neuron with its soma in the brain, dorsal to the accessory medulla. It belongs to the VPNl&d1_lateral hemilineage. It has postsynapses in the ipsilateral medulla. It has presynapses in the contralateral medulla. Its predicted neurotransmitter is gaba. Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).

Open adult MeMe_e10 neuron in VFB

Term Information

  • ID: FBbt_20004126
  • Name: adult MeMe_e10 neuron
  • Definition: Adult optic-lobe-intrinsic neuron with its soma in the brain, dorsal to the accessory medulla. It belongs to the VPNl&d1_lateral hemilineage. It has postsynapses in the ipsilateral medulla. It has presynapses in the contralateral medulla. Its predicted neurotransmitter is gaba.
  • Synonyms:
  • Type:
  • Comment: Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/FBbt_20004126",
            "symbol": "",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "GABAergic",
                "Nervous_system",
                "Neuron",
                "Visual_system"
            ],
            "short_form": "FBbt_20004126",
            "unique_facets": [
                "Adult",
                "GABAergic",
                "Nervous_system",
                "Visual_system"
            ],
            "label": "adult MeMe_e10 neuron"
        },
        "description": [
            "Adult optic-lobe-intrinsic neuron with its soma in the brain, dorsal to the accessory medulla. It belongs to the VPNl&d1_lateral hemilineage. It has postsynapses in the ipsilateral medulla. It has presynapses in the contralateral medulla. Its predicted neurotransmitter is gaba."
        ],
        "comment": [
            "Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023)."
        ]
    },
    "query": "Get JSON for Class",
    "version": "08f7a30",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00047736",
            "types": [
                "Entity",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron",
                "Visual_system",
                "has_subClass",
                "hasScRNAseq"
            ],
            "short_form": "FBbt_00047736",
            "unique_facets": [
                "Nervous_system",
                "Neuron",
                "Visual_system"
            ],
            "label": "visual system neuron"
        },
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00050014",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron",
                "has_subClass"
            ],
            "short_form": "FBbt_00050014",
            "unique_facets": [
                "Adult",
                "Nervous_system",
                "Neuron"
            ],
            "label": "adult VPNl&d1 lineage neuron"
        },
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00058207",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "GABAergic",
                "Nervous_system",
                "Neuron",
                "has_subClass",
                "hasScRNAseq"
            ],
            "short_form": "FBbt_00058207",
            "unique_facets": [
                "Adult",
                "GABAergic",
                "Nervous_system"
            ],
            "label": "adult GABAergic neuron"
        },
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00052046",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Cell",
                "Class",
                "Nervous_system",
                "Neuron",
                "has_subClass",
                "hasScRNAseq"
            ],
            "short_form": "FBbt_00052046",
            "unique_facets": [
                "Adult",
                "Nervous_system",
                "Neuron"
            ],
            "label": "adult interneuron"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013003",
                "label": "sends synaptic output to region",
                "type": "sends_synaptic_output_to_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003748",
                "types": [
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                ],
                "short_form": "FBbt_00003748",
                "unique_facets": [
                    "Adult",
                    "Nervous_system",
                    "Synaptic_neuropil_domain",
                    "Visual_system"
                ],
                "label": "medulla"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0013002",
                "label": "receives synaptic input in region",
                "type": "receives_synaptic_input_in_region"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003748",
                "types": [
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                ],
                "short_form": "FBbt_00003748",
                "unique_facets": [
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                    "Nervous_system",
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                    "Visual_system"
                ],
                "label": "medulla"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0002100",
                "label": "has soma location",
                "type": "has_soma_location"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00003625",
                "types": [
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                    "Class",
                    "Nervous_system"
                ],
                "short_form": "FBbt_00003625",
                "unique_facets": [
                    "Adult",
                    "Nervous_system"
                ],
                "label": "adult brain cell body rind"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0000053",
                "label": "bearer of",
                "type": "bearer_of"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/PATO_0000618",
                "types": [
                    "Entity",
                    "Class"
                ],
                "short_form": "PATO_0000618",
                "unique_facets": [
                    "Class"
                ],
                "label": "bilateral"
            }
        }
    ],
    "xrefs": [],
    "anatomy_channel_image": [],
    "pub_syn": [],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/Unattributed",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "Unattributed",
                "unique_facets": [
                    "pub"
                ],
                "label": ""
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": ""
        }
    ]
}