adult CB3828 neuron [FBbt_20007243]
Adult optic-lobe-intrinsic neuron with its soma in the brain, ventral-medial to the accessory medulla. It has postsynapses in the ipsilateral lobula. It has presynapses in the ipsilateral lobula. Its predicted neurotransmitter is gaba. Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).
Note
This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewerOpen adult CB3828 neuron in VFB
Term Information
- ID: FBbt_20007243
- Name: adult CB3828 neuron
- Definition: Adult optic-lobe-intrinsic neuron with its soma in the brain, ventral-medial to the accessory medulla. It has postsynapses in the ipsilateral lobula. It has presynapses in the ipsilateral lobula. Its predicted neurotransmitter is gaba.
- Synonyms:
- Type:
- Comment: Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).
VFB Term Json
{
"term": {
"core": {
"iri": "http://purl.obolibrary.org/obo/FBbt_20007243",
"symbol": "CB3828",
"types": [
"Entity",
"Adult",
"Anatomy",
"Cell",
"Class",
"GABAergic",
"Nervous_system",
"Neuron",
"Visual_system"
],
"short_form": "FBbt_20007243",
"unique_facets": [
"Adult",
"GABAergic",
"Nervous_system",
"Visual_system"
],
"label": "adult CB3828 neuron"
},
"description": [
"Adult optic-lobe-intrinsic neuron with its soma in the brain, ventral-medial to the accessory medulla. It has postsynapses in the ipsilateral lobula. It has presynapses in the ipsilateral lobula. Its predicted neurotransmitter is gaba."
],
"comment": [
"Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023)."
]
},
"query": "Get JSON for Class",
"version": "08f7a30",
"parents": [
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00047736",
"types": [
"Entity",
"Anatomy",
"Cell",
"Class",
"Nervous_system",
"Neuron",
"Visual_system",
"has_subClass",
"hasScRNAseq"
],
"short_form": "FBbt_00047736",
"unique_facets": [
"Nervous_system",
"Neuron",
"Visual_system"
],
"label": "visual system neuron"
},
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00052046",
"types": [
"Entity",
"Adult",
"Anatomy",
"Cell",
"Class",
"Nervous_system",
"Neuron",
"has_subClass",
"hasScRNAseq"
],
"short_form": "FBbt_00052046",
"unique_facets": [
"Adult",
"Nervous_system",
"Neuron"
],
"label": "adult interneuron"
},
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00058207",
"types": [
"Entity",
"Adult",
"Anatomy",
"Cell",
"Class",
"GABAergic",
"Nervous_system",
"Neuron",
"has_subClass",
"hasScRNAseq"
],
"short_form": "FBbt_00058207",
"unique_facets": [
"Adult",
"GABAergic",
"Nervous_system"
],
"label": "adult GABAergic neuron"
}
],
"relationships": [
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013003",
"label": "sends synaptic output to region",
"type": "sends_synaptic_output_to_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00003852",
"types": [
"Entity",
"Adult",
"Anatomy",
"Class",
"Nervous_system",
"Synaptic_neuropil",
"Synaptic_neuropil_domain",
"Visual_system"
],
"short_form": "FBbt_00003852",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_domain",
"Visual_system"
],
"label": "lobula"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013002",
"label": "receives synaptic input in region",
"type": "receives_synaptic_input_in_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00003852",
"types": [
"Entity",
"Adult",
"Anatomy",
"Class",
"Nervous_system",
"Synaptic_neuropil",
"Synaptic_neuropil_domain",
"Visual_system"
],
"short_form": "FBbt_00003852",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_domain",
"Visual_system"
],
"label": "lobula"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0002100",
"label": "has soma location",
"type": "has_soma_location"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00003625",
"types": [
"Entity",
"Adult",
"Anatomy",
"Class",
"Nervous_system"
],
"short_form": "FBbt_00003625",
"unique_facets": [
"Adult",
"Nervous_system"
],
"label": "adult brain cell body rind"
}
}
],
"xrefs": [],
"anatomy_channel_image": [],
"pub_syn": [],
"def_pubs": [
{
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
"types": [
"Entity",
"Individual",
"pub"
],
"short_form": "Unattributed",
"unique_facets": [
"pub"
],
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
]
}
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