raphe nuclei [UBERON_0004684]

The raphe nuclei are thin plates of cells in and immediately adjacent to the sagittal plane. we treat NR obscurus, NR magnus etc as parts of the raphe nuclei. This is consistent with treatment in FMA, where the class is ‘set of raphe nuclei’

Open raphe nuclei in VFB

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/UBERON_0004684",
            "symbol": "",
            "types": [
                "Entity",
                "Anatomy",
                "Class"
            ],
            "short_form": "UBERON_0004684",
            "label": "raphe nuclei"
        },
        "description": [
            "The raphe nuclei are thin plates of cells in and immediately adjacent to the sagittal plane."
        ],
        "comment": [
            "we treat NR obscurus, NR magnus etc as parts of the raphe nuclei. This is consistent with treatment in FMA, where the class is 'set of raphe nuclei'"
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/UBERON_0002616",
            "types": [
                "Entity",
                "Anatomy",
                "Class"
            ],
            "short_form": "UBERON_0002616",
            "label": "regional part of brain"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/BFO_0000050",
                "label": "is part of",
                "type": "part_of"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/UBERON_0002275",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Class"
                ],
                "short_form": "UBERON_0002275",
                "label": "reticular formation"
            }
        },
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0002215",
                "label": "capable of",
                "type": "capable_of"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/GO_0001820",
                "types": [
                    "Entity",
                    "Class"
                ],
                "short_form": "GO_0001820",
                "label": "serotonin secretion"
            }
        }
    ],
    "xrefs": [],
    "anatomy_channel_image": [],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_related_synonym",
                "label": "raphe nucleus",
                "type": "http://purl.obolibrary.org/obo/uberon/core#LATIN"
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "Unattributed",
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        }
    ],
    "def_pubs": []
}