adult serotonergic PMP neuron [FBbt_00049528]

Adult serotonergic neuron whose cell body is located in the posterior medial protocerebrum (Sitaraman et al., 2008). There around 12-16 neurons (Alekseyenko et al., 2010), organized into three clusters along the dorsal-ventral axis (Pooryasin and Fiala, 2015). Sitaraman et al. (2008) note that these posteriorly-located cells may correspond to ‘anterior’ serotonergic neurons identified by Valles and White (1988).

Open adult serotonergic PMP neuron in VFB

Example Images

adult serotonergic PMP neuron adult serotonergic PMP neuron adult serotonergic PMP neuron adult serotonergic PMP neuron adult serotonergic PMP neuron

VFB Term Json

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