adult medulla visual centrifugal neuron 03 [FBbt_20007296]
Adult visual centrifugal neuron with its soma in the brain, near to the antler. It belongs to the SMPp&v1_ventral hemilineage. It has postsynapses in the contralateral medulla. It has presynapses in the contralateral medulla. Its predicted neurotransmitter is dopamine. Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).
Note
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Term Information
- ID: FBbt_20007296
- Name: adult medulla visual centrifugal neuron 03
- Definition: Adult visual centrifugal neuron with its soma in the brain, near to the antler. It belongs to the SMPp&v1_ventral hemilineage. It has postsynapses in the contralateral medulla. It has presynapses in the contralateral medulla. Its predicted neurotransmitter is dopamine.
- Synonyms:
- Type:
- Comment: Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).
VFB Term Json
{
"term": {
"core": {
"iri": "http://purl.obolibrary.org/obo/FBbt_20007296",
"symbol": "cM03",
"types": [
"Entity",
"Adult",
"Anatomy",
"Cell",
"Class",
"Dopaminergic",
"Nervous_system",
"Neuron",
"Visual_system"
],
"short_form": "FBbt_20007296",
"unique_facets": [
"Adult",
"Dopaminergic",
"Nervous_system",
"Visual_system"
],
"label": "adult medulla visual centrifugal neuron 03"
},
"description": [
"Adult visual centrifugal neuron with its soma in the brain, near to the antler. It belongs to the SMPp&v1_ventral hemilineage. It has postsynapses in the contralateral medulla. It has presynapses in the contralateral medulla. Its predicted neurotransmitter is dopamine."
],
"comment": [
"Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023)."
]
},
"query": "Get JSON for Class",
"version": "08f7a30",
"parents": [
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00058206",
"types": [
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"Cell",
"Class",
"Dopaminergic",
"Nervous_system",
"Neuron",
"has_subClass",
"hasScRNAseq"
],
"short_form": "FBbt_00058206",
"unique_facets": [
"Adult",
"Dopaminergic",
"Nervous_system"
],
"label": "adult dopaminergic neuron"
},
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00059244",
"types": [
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"Cell",
"Class",
"Nervous_system",
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],
"short_form": "FBbt_00059244",
"unique_facets": [
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],
"label": "adult visual centrifugal neuron"
},
{
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"iri": "http://purl.obolibrary.org/obo/FBbt_00001366",
"types": [
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"Anatomy",
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"Class",
"Nervous_system",
"Neuron",
"has_subClass",
"hasScRNAseq"
],
"short_form": "FBbt_00001366",
"unique_facets": [
"Nervous_system",
"Neuron"
],
"label": "supraesophageal ganglion neuron"
},
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00047736",
"types": [
"Entity",
"Anatomy",
"Cell",
"Class",
"Nervous_system",
"Neuron",
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"has_subClass",
"hasScRNAseq"
],
"short_form": "FBbt_00047736",
"unique_facets": [
"Nervous_system",
"Neuron",
"Visual_system"
],
"label": "visual system neuron"
},
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00050195",
"types": [
"Entity",
"Adult",
"Anatomy",
"Cell",
"Class",
"Nervous_system",
"Neuron",
"has_subClass"
],
"short_form": "FBbt_00050195",
"unique_facets": [
"Adult",
"Nervous_system",
"Neuron"
],
"label": "adult SMPp&v1 lineage neuron"
}
],
"relationships": [
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013003",
"label": "sends synaptic output to region",
"type": "sends_synaptic_output_to_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00003748",
"types": [
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"Adult",
"Anatomy",
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"Synaptic_neuropil",
"Synaptic_neuropil_domain",
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],
"short_form": "FBbt_00003748",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_domain",
"Visual_system"
],
"label": "medulla"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013002",
"label": "receives synaptic input in region",
"type": "receives_synaptic_input_in_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00003748",
"types": [
"Entity",
"Adult",
"Anatomy",
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"Nervous_system",
"Synaptic_neuropil",
"Synaptic_neuropil_domain",
"Visual_system"
],
"short_form": "FBbt_00003748",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_domain",
"Visual_system"
],
"label": "medulla"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0002100",
"label": "has soma location",
"type": "has_soma_location"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00048542",
"types": [
"Entity",
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"Anatomy",
"Class",
"Nervous_system"
],
"short_form": "FBbt_00048542",
"unique_facets": [
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"Nervous_system"
],
"label": "cell body rind of adult antler"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0000053",
"label": "bearer of",
"type": "bearer_of"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/PATO_0000618",
"types": [
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"Class"
],
"short_form": "PATO_0000618",
"unique_facets": [
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],
"label": "bilateral"
}
}
],
"xrefs": [],
"anatomy_channel_image": [],
"pub_syn": [],
"def_pubs": [
{
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
"types": [
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],
"short_form": "Unattributed",
"unique_facets": [
"pub"
],
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
]
}
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