VFB Content Report

An auto generated report detailing the current types and quantity of images and annotations currently publicly available on VFB. This will update after a new data release.

VFB Content Report 2022-07-26

Report of content found at http://pdb.virtualflybrain.org on Tue, 26 Jul 2022 09:05:04

Ontology Content

Anatomy Classes Publications
All Terms 18578 1485
All Nervous System Parts 13171 1016
All Neurons 9741 745
Characterised Neurons 5877 745
Provisional Neurons 3864 8
All Nervous System Regions 1382 241
Synaptic Neuropils 608 134
Neuron Projection Bundles 559 123
Cell Body Rinds 132 8
Sense Organs 845 148

98551 formal assertions, of which 26408 are SubClassOf assertions and 72143 are other relationship types

88612 formal assertions on nervous system components, of which 20624 are SubClassOf assertions and 67988 are other relationship types

Image Content

167645 total images from 98 datasets
69891 single neuron images of 5779 cell types
48120 images of expression patterns of 17158 drivers
4858 images of expression patterns of 676 split combinations

Annotations

4471 annotations recording 545 types of neurons that 1199 specific split combinations are expressed in.
113771 annotations recording 3792 types of anatomical structures that 16888 specific driver lines are expressed in.
15522 annotations recording 1701 types of neurons that 4402 specific driver lines are expressed in.

Connectivity

Neuron Number of Neurons Input/Output Entity Number of Entities Connections
Any neuron (individuals) 28454 Any neuron (individuals) 28454 3461878
Any neuron (individuals) 22590 Region (individuals) 218 299710
Any neuron (classes) 308 Muscle (classes) 282 465
Any neuron (classes) 738 Sense organ (classes) 390 481

Content by Template

Template Name Datasets Images Single Neurons EM Neurons Full Expression Patterns Split Expression Patterns Partial Expression Patterns Painted domains
Adult Head (McKellar2020) 1 18 0 0 0 0 0 0
adult VNS template - Court2018 10 3217 1 0 3193 494 0 22
JRC_FlyEM_Hemibrain 3 43943 43830 43829 0 0 0 114
JRC2018Unisex 62 119025 64362 47583 31655 1632 38796 46
L1 larval CNS ssTEM - Cardona/Janelia 22 3463 3463 3463 0 0 0 0
JRC2018UnisexVNC 21 20604 2030 2029 8314 625 10240 21
adult brain template Ito2014 1 75 1 0 0 0 0 75
L3 CNS template - Wood2018 2 257 2 0 0 0 2 255
adult brain template JFRC2 21 41940 16299 0 25272 600 16127 58