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Datasets available on VFB

Here is a list of all available datasets available on Virtual Fly Brain (VFB).

1 - Adult Brain fru clones (Cachero2010) [Cachero2010]

[confocal microscopy; Adult Brain fru clones (Cachero2010); JRC2018Unisex; Cachero et al., 2010, Curr. Biol. 20(18): 1589–1601; pSG-d_M clone of Cachero 2010; adult brain template JFRC2; aIP-a_M clone of Cachero 2010; aDT-f_M clone of Cachero 2010]

Open Adult Brain fru clones (Cachero2010) in VFB

Example Images

Adult Brain fru clones (Cachero2010) Adult Brain fru clones (Cachero2010) Adult Brain fru clones (Cachero2010)

VFB Term Json

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            "short_form": "Cachero2010",
            "label": "Adult Brain fru clones (Cachero2010)"
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        "link": "http://flybase.org/reports/FBrf0211926.html",
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                "short_form": "VFB_00017898",
                "label": "aDT-f_M clone of Cachero 2010"
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                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
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                    "short_form": "VFBc_00017898",
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                    "label": "confocal microscopy"
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                "short_form": "VFB_00017898",
                "label": "aDT-f_M clone of Cachero 2010"
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                        "short_form": "VFBc_00017894",
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                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
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                    "short_form": "VFBc_00017898",
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                    "short_form": "FBbi_00000251",
                    "label": "confocal microscopy"
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                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00017944",
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                "short_form": "VFB_00017944",
                "label": "pSG-d_M clone of Cachero 2010"
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                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
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                    "short_form": "VFBc_00017944",
                    "label": "pSG-d_M_c"
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                "iri": "http://virtualflybrain.org/reports/VFB_00017944",
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                "short_form": "VFB_00017944",
                "label": "pSG-d_M clone of Cachero 2010"
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                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
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                    "short_form": "VFBc_00017944",
                    "label": "pSG-d_M_c"
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                    "label": "confocal microscopy"
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                "iri": "http://virtualflybrain.org/reports/VFB_00017901",
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                    "has_image"
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                "short_form": "VFB_00017901",
                "label": "aIP-a_M clone of Cachero 2010"
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                        "label": "adult brain template JFRC2"
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                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0001/7901/"
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                "channel": {
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                    "label": "aIP-a_M_c"
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                    "types": [
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                "short_form": "FBrf0211926",
                "label": "Cachero et al., 2010, Curr. Biol. 20(18): 1589--1601"
            },
            "FlyBase": "FBrf0211926",
            "PubMed": "20832311",
            "DOI": "10.1016/j.cub.2010.07.045"
        }
    ],
    "dataset_counts": {
        "images": 119,
        "types": 84
    }
}

2 - Adult VNC neuropils (Court2020) [Court2020]

[ITD haltere tract on adult VNC, JRC2018VU; lower tectulum on adult VNC, JRC2018VU; dorsal median tract on adult VNC, JRC2018VU; JRC2018UnisexVNC; medial ventral association center on adult VNC, JRC2018VU; Adult VNC neuropils (Court2020); Court et al., 2017; adult prothoracic neuromere on adult VNC, JRC2018VU; computer graphic]

Open Adult VNC neuropils (Court2020) in VFB

Example Images

Adult VNC neuropils (Court2020) Adult VNC neuropils (Court2020) Adult VNC neuropils (Court2020) Adult VNC neuropils (Court2020) Adult VNC neuropils (Court2020)

VFB Term Json

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    "term": {
        "core": {
            "iri": "http://virtualflybrain.org/reports/Court2020",
            "symbol": "",
            "types": [
                "Entity",
                "DataSet",
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            ],
            "short_form": "Court2020",
            "label": "Adult VNC neuropils (Court2020)"
        },
        "link": "",
        "description": [],
        "comment": []
    },
    "query": "Get JSON for DataSet",
    "version": "44725ae",
    "anatomy_channel_image": [
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                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00104650",
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                    "Synaptic_neuropil_domain",
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                "short_form": "VFB_00104650",
                "label": "medial ventral association center on adult VNC, JRC2018VU"
            },
            "channel_image": {
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                        "short_form": "VFBc_00200000",
                        "label": "JRC2018UnisexVNC_c"
                    },
                    "index": [
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                        "short_form": "VFB_00200000",
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                    "iri": "http://virtualflybrain.org/reports/VFBc_00104648",
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                    "short_form": "VFBc_00104648",
                    "label": "medial ventral association center on adult VNC, JRC2018VU_c"
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                    "label": "ITD haltere tract on adult VNC, JRC2018VU_c"
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}

3 - Adult VNS neuropils (Court2017) [Court2017]

[accessory prothoracic nerve on adult VNS template, Court2018; adult accessory mesothoracic neuromere on adult VNS template, Court2018; accessory metathoracic nerve on adult VNS template, Court2018; prothoracic leg nerve on adult VNS template, Court2018; adult VNS template - Court2018; Court et al., 2017; Adult VNS neuropils (Court2017); accessory mesothoracic nerve on adult VNS template, Court2018; computer graphic]

Open Adult VNS neuropils (Court2017) in VFB

Example Images

Adult VNS neuropils (Court2017) Adult VNS neuropils (Court2017) Adult VNS neuropils (Court2017) Adult VNS neuropils (Court2017) Adult VNS neuropils (Court2017)

VFB Term Json

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4 - AMMC local and projection neurons (Matsuo2016) [Matsuo2016]

[confocal microscopy; AMMC local and projection neurons (Matsuo2016); AMMC-A1; Bi7; JRC2018Unisex; Matsuo et al., 2016, J. Comp. Neurol. 524(6): 1099–1164; adult brain template JFRC2; Bb4]

Open AMMC local and projection neurons (Matsuo2016) in VFB

Example Images

AMMC local and projection neurons (Matsuo2016) AMMC local and projection neurons (Matsuo2016) AMMC local and projection neurons (Matsuo2016) AMMC local and projection neurons (Matsuo2016)

VFB Term Json

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5 - Biomechanical origins of proprioceptive maps in the Drosophila leg [Mamiya2022]

Biomechanical origins of proprioceptive maps in the Drosophila leg (Mamiya et al. 2022)

Open Biomechanical origins of proprioceptive maps in the Drosophila leg in VFB

Term Information

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  • Name: Biomechanical origins of proprioceptive maps in the Drosophila leg
  • Definition: Biomechanical origins of proprioceptive maps in the Drosophila leg (Mamiya et al. 2022)
  • Synonyms:
  • Type:
  • Comment:

Example Images

Biomechanical origins of proprioceptive maps in the Drosophila leg Biomechanical origins of proprioceptive maps in the Drosophila leg

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6 - BrainName neuropils and tracts - Ito half-brain [BrainName_Ito_half_brain]

[Ito et al., 2014, Neuron 81(4): 755–765; wedge commissure on adult brain template Ito2014; adult antennal lobe on adult brain template Ito2014; epaulette on adult brain template Ito2014; medial cerebro-cervical fascicle on adult brain template Ito2014; superior medial protocerebrum on adult brain template Ito2014; BrainName neuropils and tracts - Ito half-brain; computer graphic]

Open BrainName neuropils and tracts - Ito half-brain in VFB

Example Images

BrainName neuropils and tracts - Ito half-brain BrainName neuropils and tracts - Ito half-brain BrainName neuropils and tracts - Ito half-brain BrainName neuropils and tracts - Ito half-brain BrainName neuropils and tracts - Ito half-brain

VFB Term Json

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                "Individual"
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            "short_form": "BrainName_Ito_half_brain",
            "label": "BrainName neuropils and tracts - Ito half-brain"
        },
        "link": "http://flybase.org/reports/FBrf0224194.html",
        "description": [],
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                "short_form": "VFB_00030814",
                "label": "superior medial protocerebrum on adult brain template Ito2014"
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                    },
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7 - BrainName neuropils on adult brain JFRC2 (Jenett, Shinomya) [JenettShinomya_BrainName]

[Ito et al., 2014, Neuron 81(4): 755–765; pedunculus of adult mushroom body on adult brain template JFRC2; lateral horn on adult brain template JFRC2; superior neuropils on adult brain template JFRC2; BrainName neuropils on adult brain JFRC2 (Jenett, Shinomya); superior clamp on adult brain template JFRC2; central body on adult brain template JFRC2; computer graphic]

Open BrainName neuropils on adult brain JFRC2 (Jenett, Shinomya) in VFB

Example Images

BrainName neuropils on adult brain JFRC2 (Jenett, Shinomya) BrainName neuropils on adult brain JFRC2 (Jenett, Shinomya) BrainName neuropils on adult brain JFRC2 (Jenett, Shinomya) BrainName neuropils on adult brain JFRC2 (Jenett, Shinomya) BrainName neuropils on adult brain JFRC2 (Jenett, Shinomya)

VFB Term Json

{
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            "symbol": "",
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                "DataSet",
                "Individual"
            ],
            "short_form": "JenettShinomya_BrainName",
            "label": "BrainName neuropils on adult brain JFRC2 (Jenett, Shinomya)"
        },
        "link": "",
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        "comment": []
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    "query": "Get JSON for DataSet",
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                    "Synaptic_neuropil_domain",
                    "VFB",
                    "has_image"
                ],
                "short_form": "VFB_00030901",
                "label": "pedunculus of adult mushroom body on adult brain template JFRC2"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00017894",
                        "types": [
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                            "Template",
                            "VFB"
                        ],
                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
                    },
                    "index": [
                        17
                    ],
                    "template_anatomy": {
                        "symbol": "",
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                            "Nervous_system",
                            "Template",
                            "VFB",
                            "has_image"
                        ],
                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0003/0901/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00030901",
                    "types": [
                        "Entity",
                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00030901",
                    "label": "MB_PED - painted domain JFRC2_c"
                },
                "imaging_technique": {
                    "symbol": "",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000224",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000224",
                    "label": "computer graphic"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00030871",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Individual",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_block",
                    "VFB",
                    "has_image"
                ],
                "short_form": "VFB_00030871",
                "label": "superior neuropils on adult brain template JFRC2"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00017894",
                        "types": [
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                            "Individual",
                            "Template",
                            "VFB"
                        ],
                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
                    },
                    "index": [
                        108
                    ],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00017894",
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                            "Anatomy",
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                            "Nervous_system",
                            "Template",
                            "VFB",
                            "has_image"
                        ],
                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0003/0871/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00030871",
                    "types": [
                        "Entity",
                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00030871",
                    "label": "SNP - painted domain JFRC2_c"
                },
                "imaging_technique": {
                    "symbol": "",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000224",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000224",
                    "label": "computer graphic"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00030874",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Individual",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain",
                    "VFB",
                    "has_image"
                ],
                "short_form": "VFB_00030874",
                "label": "central body on adult brain template JFRC2"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00017894",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template",
                            "VFB"
                        ],
                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
                    },
                    "index": [
                        111
                    ],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00017894",
                        "types": [
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                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "VFB",
                            "has_image"
                        ],
                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0003/0874/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00030874",
                    "types": [
                        "Entity",
                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00030874",
                    "label": "CB - painted domain JFRC2_c"
                },
                "imaging_technique": {
                    "symbol": "",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000224",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000224",
                    "label": "computer graphic"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00030900",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Individual",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain",
                    "VFB",
                    "has_image"
                ],
                "short_form": "VFB_00030900",
                "label": "lateral horn on adult brain template JFRC2"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00017894",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template",
                            "VFB"
                        ],
                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
                    },
                    "index": [
                        7
                    ],
                    "template_anatomy": {
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                        "iri": "http://virtualflybrain.org/reports/VFB_00017894",
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                            "Nervous_system",
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                            "has_image"
                        ],
                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0003/0900/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00030900",
                    "types": [
                        "Entity",
                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00030900",
                    "label": "LH - painted domain JFRC2_c"
                },
                "imaging_technique": {
                    "symbol": "",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000224",
                    "types": [
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                        "Class"
                    ],
                    "short_form": "FBbi_00000224",
                    "label": "computer graphic"
                }
            }
        },
        {
            "anatomy": {
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                "iri": "http://virtualflybrain.org/reports/VFB_00030618",
                "types": [
                    "Entity",
                    "Adult",
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                    "Individual",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_subdomain",
                    "VFB",
                    "has_image"
                ],
                "short_form": "VFB_00030618",
                "label": "superior clamp on adult brain template JFRC2"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00017894",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template",
                            "VFB"
                        ],
                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
                    },
                    "index": [
                        39
                    ],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00017894",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "VFB",
                            "has_image"
                        ],
                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0003/0618/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00030618",
                    "types": [
                        "Entity",
                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00030618",
                    "label": "SCL_JFRC_c"
                },
                "imaging_technique": {
                    "symbol": "",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000224",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000224",
                    "label": "computer graphic"
                }
            }
        }
    ],
    "xrefs": [],
    "license": [
        {
            "core": {
                "symbol": "",
                "iri": null,
                "types": null,
                "short_form": null,
                "label": ""
            },
            "icon": "",
            "link": ""
        }
    ],
    "pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0224194",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0224194",
                "label": "Ito et al., 2014, Neuron 81(4): 755--765"
            },
            "FlyBase": "FBrf0224194",
            "PubMed": "24559671",
            "DOI": "10.1016/j.neuron.2013.12.017"
        }
    ],
    "dataset_counts": {
        "images": 58,
        "types": 58
    }
}

8 - BrainTrap lines (Knowles-Barley2010) [Knowles_Barley2010]

[Knowles-Barley et al., 2010, Database (Oxford) 2010: baq005; confocal microscopy; FBti0143529; FBti0143596; JRC2018Unisex; adult brain template JFRC2; BrainTrap lines (Knowles-Barley2010); FBti0143647]

Open BrainTrap lines (Knowles-Barley2010) in VFB

Example Images

BrainTrap lines (Knowles-Barley2010) BrainTrap lines (Knowles-Barley2010) BrainTrap lines (Knowles-Barley2010) BrainTrap lines (Knowles-Barley2010) BrainTrap lines (Knowles-Barley2010)

VFB Term Json

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        "core": {
            "iri": "http://virtualflybrain.org/reports/Knowles_Barley2010",
            "symbol": "",
            "types": [
                "Entity",
                "DataSet",
                "Individual"
            ],
            "short_form": "Knowles_Barley2010",
            "label": "BrainTrap lines (Knowles-Barley2010)"
        },
        "link": "http://flybase.org/reports/FBrf0211243.html",
        "description": [],
        "comment": []
    },
    "query": "Get JSON for DataSet",
    "version": "44725ae",
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00024108",
                "types": [
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                    "Adult",
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                    "Expression_pattern",
                    "Individual",
                    "Nervous_system",
                    "VFB",
                    "has_image"
                ],
                "short_form": "VFB_00024108",
                "label": "FBti0143529"
            },
            "channel_image": {
                "image": {
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                        "label": "JFRC2_template_c"
                    },
                    "index": [],
                    "template_anatomy": {
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                            "VFB",
                            "has_image"
                        ],
                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0002/4108/"
                },
                "channel": {
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                    "iri": "http://virtualflybrain.org/reports/VFBc_00024108",
                    "types": [
                        "Entity",
                        "Individual",
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                    ],
                    "short_form": "VFBc_00024108",
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                },
                "imaging_technique": {
                    "symbol": "Confocal",
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                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000251",
                    "label": "confocal microscopy"
                }
            }
        },
        {
            "anatomy": {
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                ],
                "short_form": "VFB_00024108",
                "label": "FBti0143529"
            },
            "channel_image": {
                "image": {
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                        ],
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                        "label": "JRC2018Unisex_c"
                    },
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                            "has_image"
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                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0002/4108/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
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                },
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                    "label": "confocal microscopy"
                }
            }
        },
        {
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                    "Nervous_system",
                    "VFB",
                    "has_image"
                ],
                "short_form": "VFB_00023926",
                "label": "FBti0143647"
            },
            "channel_image": {
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                    },
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                },
                "channel": {
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                    ],
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                },
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                }
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        },
        {
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                    "has_image"
                ],
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                        ],
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                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0002/3926/VFB_00101567/"
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                "channel": {
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                    "iri": "http://virtualflybrain.org/reports/VFBc_00023926",
                    "types": [
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                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00023926",
                    "label": "FBti0143647_c"
                },
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                "iri": "http://virtualflybrain.org/reports/VFB_00024130",
                "types": [
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                    "Adult",
                    "Anatomy",
                    "Expression_pattern",
                    "Individual",
                    "Nervous_system",
                    "VFB",
                    "has_image"
                ],
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                "label": "FBti0143596"
            },
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                    },
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                            "has_image"
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                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0002/4130/"
                },
                "channel": {
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                },
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                        "Class"
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                    "label": "confocal microscopy"
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            "link_base": "http://braintrap.inf.ed.ac.uk/braintrap/line/show?FBti=",
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                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/BrainTrap",
                "types": [
                    "Entity",
                    "Individual",
                    "Site"
                ],
                "short_form": "BrainTrap",
                "label": "BrainTrap"
            },
            "is_data_source": [
                true
            ],
            "link_postfix": "",
            "icon": "http://braintrap.inf.ed.ac.uk/braintrap/images/BrainTrap-bg1.gif",
            "accession": "",
            "link_text": "BrainTrap lines (Knowles-Barley2010) on BrainTrap",
            "homepage": "http://braintrap.inf.ed.ac.uk/braintrap/"
        }
    ],
    "license": [
        {
            "core": {
                "symbol": "",
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    ],
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                "label": "Knowles-Barley et al., 2010, Database (Oxford) 2010: baq005"
            },
            "FlyBase": "FBrf0211243",
            "PubMed": "20624714",
            "DOI": "10.1093/database/baq005"
        }
    ],
    "dataset_counts": {
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        "types": 504
    }
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9 - central brain neurons by lineage, Lee2020 [Lee2020]

A catalogue of single neuron images covering 18 central brain lineages.

Open central brain neurons by lineage, Lee2020 in VFB

Example Images

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10 - central brain neurons by lineage, Lee2020 [Lee_Lineage2020]

A catalogue of single neuron images covering 18 central brain lineages.

Open central brain neurons by lineage, Lee2020 in VFB

Example Images

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11 - Comparative Connectomics Reveals How Partner Identity, Location, and Activity Specify Synaptic Connectivity in Drosophila (Valdes-Aleman et al. 2021) [Valdes_Aleman2021]

L1 EM reconstructed neurons from Valdes-Aleman et al. 2021

Open Comparative Connectomics Reveals How Partner Identity, Location, and Activity Specify Synaptic Connectivity in Drosophila (Valdes-Aleman et al. 2021) in VFB

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                "Individual"
            ],
            "short_form": "Valdes_Aleman2021",
            "label": "Comparative Connectomics Reveals How Partner Identity, Location, and Activity Specify Synaptic Connectivity in Drosophila (Valdes-Aleman et al. 2021)"
        },
        "link": "",
        "description": [
            "L1 EM reconstructed neurons from Valdes-Aleman et al. 2021"
        ],
        "comment": []
    },
    "query": "Get JSON for DataSet",
    "version": "44725ae",
    "anatomy_channel_image": [],
    "xrefs": [],
    "license": [
        {
            "core": {
                "symbol": "",
                "iri": null,
                "types": null,
                "short_form": null,
                "label": ""
            },
            "icon": "",
            "link": ""
        }
    ],
    "pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0247750",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0247750",
                "label": "Valdes-Aleman et al., 2021, Neuron 109(1): 105--122.e7"
            },
            "FlyBase": "FBrf0247750",
            "PubMed": "33120017",
            "DOI": "10.1016/j.neuron.2020.10.004"
        }
    ],
    "dataset_counts": {
        "images": 0,
        "types": 0
    }
}

12 - Dickson lab VT line collection - VDRC images [Dickson_VT]

[confocal microscopy; Tirian & Dickson, 2017; VDRC_VT019992_LexAGAD_attP2_2; JRC2018Unisex; Dickson lab VT line collection - VDRC images; VDRC_VT014966_LexAGAD_attP40_1; adult brain template JFRC2; VDRC_VT019746_GAL4_attP2_1]

Open Dickson lab VT line collection - VDRC images in VFB

Example Images

Dickson lab VT line collection - VDRC images Dickson lab VT line collection - VDRC images Dickson lab VT line collection - VDRC images Dickson lab VT line collection - VDRC images

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://virtualflybrain.org/reports/Dickson_VT",
            "symbol": "",
            "types": [
                "Entity",
                "DataSet",
                "Individual"
            ],
            "short_form": "Dickson_VT",
            "label": "Dickson lab VT line collection - VDRC images"
        },
        "link": "https://stockcenter.vdrc.at/control/keywordsearch?VIEW_SIZE=100&SEARCH_CATEGORY_ID=VDRC_All&library=VT-GAL4",
        "description": [],
        "comment": []
    },
    "query": "Get JSON for DataSet",
    "version": "44725ae",
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00030191",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Expression_pattern",
                    "Individual",
                    "Nervous_system",
                    "VFB",
                    "has_image"
                ],
                "short_form": "VFB_00030191",
                "label": "VDRC_VT019746_GAL4_attP2_1"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
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                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0003/0191/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00030191",
                    "types": [
                        "Entity",
                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00030191",
                    "label": "VDRC_VT019746_GAL4_attP2_1_c"
                },
                "imaging_technique": {
                    "symbol": "Confocal",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000251",
                    "types": [
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                    "short_form": "FBbi_00000251",
                    "label": "confocal microscopy"
                }
            }
        },
        {
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                "types": [
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                    "Expression_pattern",
                    "Individual",
                    "Nervous_system",
                    "VFB",
                    "has_image"
                ],
                "short_form": "VFB_00030191",
                "label": "VDRC_VT019746_GAL4_attP2_1"
            },
            "channel_image": {
                "image": {
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                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00017894",
                        "types": [
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                            "Individual",
                            "Template",
                            "VFB"
                        ],
                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
                    },
                    "index": [],
                    "template_anatomy": {
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                            "Template",
                            "VFB",
                            "has_image"
                        ],
                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0003/0191/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00030191",
                    "types": [
                        "Entity",
                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00030191",
                    "label": "VDRC_VT019746_GAL4_attP2_1_c"
                },
                "imaging_technique": {
                    "symbol": "Confocal",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000251",
                    "types": [
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                    "short_form": "FBbi_00000251",
                    "label": "confocal microscopy"
                }
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        {
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                    "Nervous_system",
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                    "has_image"
                ],
                "short_form": "VFB_00028773",
                "label": "VDRC_VT014966_LexAGAD_attP40_1"
            },
            "channel_image": {
                "image": {
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                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
                    },
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                        "short_form": "VFB_00017894",
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                    },
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                    "types": [
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                    "short_form": "VFBc_00028773",
                    "label": "VDRC_VT014966_LexAGAD_attP40_1_c"
                },
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                    "symbol": "Confocal",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000251",
                    "types": [
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                    "short_form": "FBbi_00000251",
                    "label": "confocal microscopy"
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        {
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                "label": "VDRC_VT014966_LexAGAD_attP40_1"
            },
            "channel_image": {
                "image": {
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                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
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                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
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                            "Nervous_system",
                            "Template",
                            "has_image"
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                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0002/8773/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00028773",
                    "types": [
                        "Entity",
                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00028773",
                    "label": "VDRC_VT014966_LexAGAD_attP40_1_c"
                },
                "imaging_technique": {
                    "symbol": "Confocal",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000251",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000251",
                    "label": "confocal microscopy"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00030307",
                "types": [
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                    "Adult",
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                    "Expression_pattern",
                    "Individual",
                    "Nervous_system",
                    "VFB",
                    "has_image"
                ],
                "short_form": "VFB_00030307",
                "label": "VDRC_VT019992_LexAGAD_attP2_2"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00017894",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template",
                            "VFB"
                        ],
                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00017894",
                        "types": [
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                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "VFB",
                            "has_image"
                        ],
                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0003/0307/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00030307",
                    "types": [
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                    ],
                    "short_form": "VFBc_00030307",
                    "label": "VDRC_VT019992_LexAGAD_attP2_2_c"
                },
                "imaging_technique": {
                    "symbol": "Confocal",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000251",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000251",
                    "label": "confocal microscopy"
                }
            }
        }
    ],
    "xrefs": [
        {
            "link_base": "https://stockcenter.vdrc.at/control/keywordsearch/~VIEW_SIZE=100/~library=VT-GAL4/~SEARCH_STRING=",
            "site": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VDRC",
                "types": [
                    "Entity",
                    "Individual",
                    "Site"
                ],
                "short_form": "VDRC",
                "label": "VDRC"
            },
            "is_data_source": false,
            "link_postfix": "",
            "icon": "",
            "accession": "*",
            "link_text": "Dickson lab VT line collection - VDRC images on VDRC",
            "homepage": "https://stockcenter.vdrc.at/"
        }
    ],
    "license": [
        {
            "core": {
                "symbol": "",
                "iri": null,
                "types": null,
                "short_form": null,
                "label": ""
            },
            "icon": "",
            "link": ""
        }
    ],
    "pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "https://doi.org/10.1101/198648",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "doi_10_1101_198648",
                "label": "Tirian & Dickson, 2017"
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": "10.1101/198648"
        }
    ],
    "dataset_counts": {
        "images": 18016,
        "types": 7806
    }
}

13 - Dickson lab VT lines - FlyLight/Janelia images (2017) [Dickson2017]

[confocal microscopy; Tirian & Dickson, 2017; VT017250 GAL4 in the Adult Brain Dickson2017; Dickson lab VT lines - FlyLight/Janelia images (2017); JRC2018Unisex; VDRC; VT014430 GAL4 in the Adult VNC Dickson2017; adult VNS template - Court2018; adult brain template JFRC2; VT012791 GAL4 in the Adult Brain Dickson2017]

Open Dickson lab VT lines - FlyLight/Janelia images (2017) in VFB

Example Images

Dickson lab VT lines - FlyLight/Janelia images (2017) Dickson lab VT lines - FlyLight/Janelia images (2017) Dickson lab VT lines - FlyLight/Janelia images (2017) Dickson lab VT lines - FlyLight/Janelia images (2017) Dickson lab VT lines - FlyLight/Janelia images (2017)

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://virtualflybrain.org/reports/Dickson2017",
            "symbol": "",
            "types": [
                "Entity",
                "DataSet",
                "Individual"
            ],
            "short_form": "Dickson2017",
            "label": "Dickson lab VT lines - FlyLight/Janelia images (2017)"
        },
        "link": "https://stockcenter.vdrc.at/control/keywordsearch?VIEW_SIZE=100&SEARCH_CATEGORY_ID=VDRC_All&library=VT-GAL4",
        "description": [],
        "comment": []
    },
    "query": "Get JSON for DataSet",
    "version": "44725ae",
    "anatomy_channel_image": [
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                "symbol": "",
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                    "Expression_pattern",
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                "short_form": "VFB_00064325",
                "label": "VT012791 GAL4 in the Adult Brain Dickson2017"
            },
            "channel_image": {
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                        ],
                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
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                    "index": [],
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                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
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                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0006/4325/"
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                    "short_form": "VFBc_00064325",
                    "label": "VT012791 GAL4 in the Adult Brain_c"
                },
                "imaging_technique": {
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                    "label": "confocal microscopy"
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        },
        {
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                "short_form": "VFB_00064764",
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            },
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                    "label": "VT017250 GAL4 in the Adult Brain_c"
                },
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                }
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        },
        {
            "anatomy": {
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}

14 - EM FAFB Baltruschat et al 2021 [Baltruschat2021]

FAFB EM reconstructed neurons from Baltruschat et al 2021

Open EM FAFB Baltruschat et al 2021 in VFB

Example Images

EM FAFB Baltruschat et al 2021 EM FAFB Baltruschat et al 2021 EM FAFB Baltruschat et al 2021 EM FAFB Baltruschat et al 2021 EM FAFB Baltruschat et al 2021

VFB Term Json

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            "PubMed": "33730583",
            "DOI": "10.1016/j.celrep.2021.108871"
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    ],
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        "images": 8,
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15 - EM FAFB Bates and Schlegel et al 2020 [BatesSchlegel2020]

FAFB EM reconstructed neurons from Bates and Schlegel et al 2020

Open EM FAFB Bates and Schlegel et al 2020 in VFB

Example Images

EM FAFB Bates and Schlegel et al 2020 EM FAFB Bates and Schlegel et al 2020 EM FAFB Bates and Schlegel et al 2020 EM FAFB Bates and Schlegel et al 2020

VFB Term Json

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            "short_form": "BatesSchlegel2020",
            "label": "EM FAFB Bates and Schlegel et al 2020"
        },
        "link": "",
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            "FAFB EM reconstructed neurons from Bates and Schlegel et al 2020"
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        "comment": []
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16 - EM FAFB Coates et al 2020 [Coates2020]

FAFB EM reconstructed neurons from Coates et al 2020

Open EM FAFB Coates et al 2020 in VFB

Example Images

EM FAFB Coates et al 2020 EM FAFB Coates et al 2020 EM FAFB Coates et al 2020 EM FAFB Coates et al 2020 EM FAFB Coates et al 2020

VFB Term Json

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17 - EM FAFB Dolan and Belliart-Guerin et al. 2018 [Dolan2018]

FAFB EM reconstructed neurons from Dolan and Belliart-Guerin et al. 2018

Open EM FAFB Dolan and Belliart-Guerin et al. 2018 in VFB

Example Images

EM FAFB Dolan and Belliart-Guerin et al. 2018 EM FAFB Dolan and Belliart-Guerin et al. 2018 EM FAFB Dolan and Belliart-Guerin et al. 2018 EM FAFB Dolan and Belliart-Guerin et al. 2018

VFB Term Json

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            "short_form": "Dolan2018",
            "label": "EM FAFB Dolan and Belliart-Guerin et al. 2018"
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        "link": "https://fafb.catmaid.virtualflybrain.org",
        "description": [
            "FAFB EM reconstructed neurons from Dolan and Belliart-Guerin et al. 2018"
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        "comment": []
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18 - EM FAFB Dolan et al. 2019 [FafbDolan2019]

FAFB EM reconstructed neurons from Dolan et al. 2019

Open EM FAFB Dolan et al. 2019 in VFB

Example Images

EM FAFB Dolan et al. 2019 EM FAFB Dolan et al. 2019 EM FAFB Dolan et al. 2019 EM FAFB Dolan et al. 2019 EM FAFB Dolan et al. 2019

VFB Term Json

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19 - EM FAFB Engert et al. 2022 [Engert2022]

FAFB EM reconstructed neurons from Engert et al 2022

Open EM FAFB Engert et al. 2022 in VFB

Example Images

EM FAFB Engert et al. 2022 EM FAFB Engert et al. 2022 EM FAFB Engert et al. 2022 EM FAFB Engert et al. 2022 EM FAFB Engert et al. 2022

VFB Term Json

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        "link": "",
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