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OBO Relations Ontology (RO)

The OBO Relations Ontology (RO) is a collection of OWL relations (ObjectProperties) intended for use across a wide variety of biological ontologies.

1: exposure event or process [RO_0002310]
2: sequence atomic unit [RO_0002533]
3: sequence atomic unit [RO_0002533]
4: sequence bearer [RO_0002534]
5: sequentially ordered entity [RO_0002532]
6: sequentially ordered entity [RO_0002532]
7: system [RO_0002577]
8: system [RO_0002577]

1 - exposure event or process [RO_0002310]

A process occurring within or in the vicinity of an organism that exerts some causal influence on the organism via the interaction between an exposure stimulus and an exposure receptor. The exposure stimulus may be a process, material entity or condition (for example, lack of nutrients). The exposure receptor can be an organism, organism population or a part of an organism.

Note

This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewer

Open exposure event or process in VFB

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/RO_0002310",
            "symbol": "",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "RO_0002310",
            "label": "exposure event or process"
        },
        "description": [
            "A process occurring within or in the vicinity of an organism that exerts some causal influence on the organism via the interaction between an exposure stimulus and an exposure receptor. The exposure stimulus may be a process, material entity or condition (for example, lack of nutrients). The exposure receptor can be an organism, organism population or a part of an organism."
        ],
        "comment": []
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/BFO_0000015",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "BFO_0000015",
            "label": "process"
        }
    ],
    "relationships": [],
    "xrefs": [],
    "anatomy_channel_image": [],
    "pub_syn": [],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/Unattributed",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "Unattributed",
                "label": ""
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": ""
        }
    ]
}

2 - sequence atomic unit [RO_0002533]

Any individual unit of a collection of like units arranged in a linear order

Note

This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewer

Open sequence atomic unit in VFB

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/RO_0002533",
            "symbol": "",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "RO_0002533",
            "label": "sequence atomic unit"
        },
        "description": [
            "Any individual unit of a collection of like units arranged in a linear order"
        ],
        "comment": []
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/RO_0002532",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "RO_0002532",
            "label": "sequentially ordered entity"
        }
    ],
    "relationships": [],
    "xrefs": [],
    "anatomy_channel_image": [],
    "pub_syn": [],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/Unattributed",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "Unattributed",
                "label": ""
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": ""
        }
    ]
}

3 - sequence atomic unit [RO_0002533]

Any individual unit of a collection of like units arranged in a linear order

sequence atomic unit

ID: RO_0002533

Class

Any individual unit of a collection of like units arranged in a linear order

Open in VFB 3D Browser →

Classification

sequentially ordered entity

4 - sequence bearer [RO_0002534]

Any entity that can be divided into parts such that each part is an atomical unit of a sequence

Note

This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewer

Open sequence bearer in VFB

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/RO_0002534",
            "symbol": "",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "RO_0002534",
            "label": "sequence bearer"
        },
        "description": [
            "Any entity that can be divided into parts such that each part is an atomical unit of a sequence"
        ],
        "comment": []
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/RO_0002532",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "RO_0002532",
            "label": "sequentially ordered entity"
        }
    ],
    "relationships": [],
    "xrefs": [],
    "anatomy_channel_image": [],
    "pub_syn": [],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/Unattributed",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "Unattributed",
                "label": ""
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": ""
        }
    ]
}

5 - sequentially ordered entity [RO_0002532]

Any entity that is ordered in discrete units along a linear axis.

Note

This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewer

Open sequentially ordered entity in VFB

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/RO_0002532",
            "symbol": "",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "RO_0002532",
            "label": "sequentially ordered entity"
        },
        "description": [
            "Any entity that is ordered in discrete units along a linear axis."
        ],
        "comment": []
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/RO_0002524",
                "label": "has subsequence",
                "type": "has_subsequence"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/RO_0002533",
                "types": [
                    "Entity",
                    "Class"
                ],
                "short_form": "RO_0002533",
                "label": "sequence atomic unit"
            }
        }
    ],
    "xrefs": [],
    "anatomy_channel_image": [],
    "pub_syn": [],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/Unattributed",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "Unattributed",
                "label": ""
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": ""
        }
    ]
}

6 - sequentially ordered entity [RO_0002532]

Any entity that is ordered in discrete units along a linear axis.

sequentially ordered entity

ID: RO_0002532

Class

Any entity that is ordered in discrete units along a linear axis.

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Relationships

has subsequence: sequence atomic unit

7 - system [RO_0002577]

A material entity consisting of multiple components that are causally integrated.

Note

This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewer

Open system in VFB

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/RO_0002577",
            "symbol": "",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "RO_0002577",
            "label": "system"
        },
        "description": [
            "A material entity consisting of multiple components that are causally integrated."
        ],
        "comment": []
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/BFO_0000040",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "BFO_0000040",
            "label": "material entity"
        }
    ],
    "relationships": [],
    "xrefs": [],
    "anatomy_channel_image": [],
    "pub_syn": [],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/Unattributed",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "Unattributed",
                "label": ""
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": ""
        }
    ]
}

8 - system [RO_0002577]

A material entity consisting of multiple components that are causally integrated.

system

ID: RO_0002577

Class

A material entity consisting of multiple components that are causally integrated.

Open in VFB 3D Browser →

Classification

material entity

Downloads

Image files aligned to neuron 16770 - flipped - radius 500 (FANC:600380):

Image files aligned to neuron 11413 - radius 500 (FANC:598053):

Image files aligned to neuron 11299 - radius 500 (FANC:597859):

Image files aligned to neuron 15680 - flipped - pruned by vol 109 - radius 500 (FANC:595010):

Image files aligned to neuron 12275 - flipped - pruned by vol 109 - radius 500 (FANC:594990):

Image files aligned to neuron 11792 - pruned by vol 109 - radius 500 (FANC:594926):

Image files aligned to neuron 9899 - pruned by vol 109 - radius 500 (FANC:594253):

Image files aligned to neuron 13025 - pruned by vol 109 - radius 500 (FANC:594177):

Image files aligned to neuron 484 - pruned by vol 109 - radius 500 (FANC:593758):

Image files aligned to neuron 9187 - pruned by vol 109 - radius 500 (FANC:593559):