sequence_variant_affecting_transcript_secondary_structure [SO_1000126]
A sequence variant that affects the secondary structure (folding) of the RNA transcript molecule. OBSOLETE: This term was deleted as it conflated more than one term. The alteration is separate from the effect.
Note
This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewerOpen sequence_variant_affecting_transcript_secondary_structure in VFB
Term Information
- ID: SO_1000126
- Name: sequence_variant_affecting_transcript_secondary_structure
- Definition: A sequence variant that affects the secondary structure (folding) of the RNA transcript molecule.
- Synonyms:
- Type:
- Comment: OBSOLETE: This term was deleted as it conflated more than one term. The alteration is separate from the effect.
VFB Term Json
{
"term": {
"core": {
"iri": "http://purl.obolibrary.org/obo/SO_1000126",
"symbol": "",
"types": [
"Entity",
"Class",
"Deprecated"
],
"short_form": "SO_1000126",
"unique_facets": [
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],
"label": "sequence_variant_affecting_transcript_secondary_structure"
},
"description": [
"A sequence variant that affects the secondary structure (folding) of the RNA transcript molecule."
],
"comment": [
"OBSOLETE: This term was deleted as it conflated more than one term. The alteration is separate from the effect."
]
},
"query": "Get JSON for Class",
"version": "c58c844",
"parents": [],
"relationships": [],
"related_individuals": [
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/IAO_0100001",
"database_cross_reference": [],
"label": "term replaced by",
"type": "term_replaced_by",
"confidence_value": ""
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/SO_0001596",
"types": [
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"Class",
"has_subClass"
],
"short_form": "SO_0001596",
"unique_facets": [
"Class"
],
"label": "transcript_secondary_structure_variant"
}
}
],
"xrefs": [],
"anatomy_channel_image": [],
"pub_syn": [
{
"synonym": {
"scope": "has_exact_synonym",
"label": "sequence variant affecting transcript secondary structure",
"type": ""
},
"pub": {
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
"types": [
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"unique_facets": [
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],
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
"scope": "has_related_synonym",
"label": "mutation affecting transcript secondary structure",
"type": ""
},
"pub": {
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
"types": [
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"short_form": "Unattributed",
"unique_facets": [
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],
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
}
],
"def_pubs": []
}
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