sequence_variant_affecting_regulatory_region [SO_0000053]
A sequence_variant_effect which changes the regulatory region of a gene. OBSOLETE: This term was deleted as it conflated more than one term. The alteration is separate from the effect.
Note
This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewerOpen sequence_variant_affecting_regulatory_region in VFB
Term Information
- ID: SO_0000053
- Name: sequence_variant_affecting_regulatory_region
- Definition: A sequence_variant_effect which changes the regulatory region of a gene.
- Synonyms:
- Type:
- Comment: OBSOLETE: This term was deleted as it conflated more than one term. The alteration is separate from the effect.
VFB Term Json
{
"term": {
"core": {
"iri": "http://purl.obolibrary.org/obo/SO_0000053",
"symbol": "",
"types": [
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"Class",
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],
"short_form": "SO_0000053",
"unique_facets": [
"Deprecated"
],
"label": "sequence_variant_affecting_regulatory_region"
},
"description": [
"A sequence_variant_effect which changes the regulatory region of a gene."
],
"comment": [
"OBSOLETE: This term was deleted as it conflated more than one term. The alteration is separate from the effect."
]
},
"query": "Get JSON for Class",
"version": "c58c844",
"parents": [],
"relationships": [],
"related_individuals": [
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/IAO_0100001",
"database_cross_reference": [],
"label": "term replaced by",
"type": "term_replaced_by",
"confidence_value": ""
},
"object": {
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"iri": "http://purl.obolibrary.org/obo/SO_0001556",
"types": [
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],
"short_form": "SO_0001556",
"unique_facets": [
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],
"label": "increased_translational_product_level"
}
}
],
"xrefs": [],
"anatomy_channel_image": [],
"pub_syn": [
{
"synonym": {
"scope": "has_exact_synonym",
"label": "sequence variant affecting regulatory region",
"type": ""
},
"pub": {
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
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"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
},
{
"synonym": {
"scope": "has_related_synonym",
"label": "mutation affecting regulatory region",
"type": ""
},
"pub": {
"core": {
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"iri": "http://flybase.org/reports/Unattributed",
"types": [
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"short_form": "Unattributed",
"unique_facets": [
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],
"label": ""
},
"FlyBase": "",
"PubMed": "",
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}
}
],
"def_pubs": []
}
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