mathematically_defined_repeat [SO_0001642]

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            "short_form": "SO_0001642",
            "label": "mathematically_defined_repeat"
        },
        "description": [
            "A mathematically defined repeat (MDR) is a experimental feature that is determined by querying overlapping oligomers of length k against a database of shotgun sequence data and identifying regions in the query sequence that exceed a statistically determined threshold of repetitiveness."
        ],
        "comment": [
            "Mathematically defined repeat regions are determined without regard to the biological origin of the repetitive region. The repeat units of a MDR are the overlapping oligomers of size k that were used to for the query. Tools that can annotate mathematically defined repeats include Tallymer (Kurtz et al 2008, BMC Genomics: 517) and RePS (Wang et al, Genome Res 12(5): 824-831.)."
        ]
    },
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            "short_form": "SO_0001410",
            "label": "experimental_feature"
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}