dorsal margin ommatidium [FBbt_02000000]

An ommatidial subtype located in a single row at the dorsal margin of the eye. This ommatidial subtype is specialized to detect the e-vector of polarized sunlight. The dorsal margin ommatidium expresses the opsin Rh3 (FBgn0003249) that detects polarized light in both photoreceptor R7 and R8 cells (Fortini and Rubin, 1990).

Open dorsal margin ommatidium in VFB

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/FBbt_02000000",
            "symbol": "",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Class",
                "Nervous_system",
                "Sense_organ"
            ],
            "short_form": "FBbt_02000000",
            "label": "dorsal margin ommatidium"
        },
        "description": [
            "An ommatidial subtype located in a single row at the dorsal margin of the eye. This ommatidial subtype is specialized to detect the e-vector of polarized sunlight."
        ],
        "comment": [
            "The dorsal margin ommatidium expresses the opsin Rh3 (FBgn0003249) that detects polarized light in both photoreceptor R7 and R8 cells (Fortini and Rubin, 1990)."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/FBbt_00004510",
            "types": [
                "Entity",
                "Adult",
                "Anatomy",
                "Class",
                "Nervous_system",
                "Sense_organ"
            ],
            "short_form": "FBbt_00004510",
            "label": "ommatidium"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/BFO_0000050",
                "label": "is part of",
                "type": "part_of"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/FBbt_00111065",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Class",
                    "Nervous_system"
                ],
                "short_form": "FBbt_00111065",
                "label": "dorsal rim area"
            }
        }
    ],
    "xrefs": [],
    "anatomy_channel_image": [],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "dorsal rim ommatidium",
                "type": ""
            },
            "pub": {
                "core": {
                    "symbol": "",
                    "iri": "http://flybase.org/reports/FBrf0226257",
                    "types": [
                        "Entity",
                        "Individual",
                        "pub"
                    ],
                    "short_form": "FBrf0226257",
                    "label": "Chin et al., 2014, J. Comp. Neurol. 522(17): 3795--3816"
                },
                "FlyBase": "",
                "PubMed": "24782245",
                "DOI": "10.1002/cne.23622"
            }
        }
    ],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0051852",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0051852",
                "label": "Fortini and Rubin, 1990, Genes Dev. 4: 444--463"
            },
            "FlyBase": "",
            "PubMed": "2140105",
            "DOI": "10.1101/gad.4.3.444"
        },
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0180690",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0180690",
                "label": "Wernet and Desplan, 2004, Trends Cell Biol. 14(10): 576--584"
            },
            "FlyBase": "",
            "PubMed": "15450980",
            "DOI": "10.1016/j.tcb.2004.09.007"
        }
    ]
}