broad specificity oxidative DNA demethylase activity [GO_0035516]
broad specificity oxidative DNA demethylase activity
ID: GO_0035516
Catalysis of the reaction: a methylated nucleobase within DNA + 2-oxoglutarate + O2 = a nucleobase within DNA + formaldehyde + succinate + CO2. Catalyzes oxidative demethylation of the DNA base lesions N1- methyladenine, N3-methylcytosine, N1-methylguanine, and N3- methylthymine. Can also act of RNA.
This reaction directly reverses the alkylation on a nucleotide within DNA. Do not confuse with 5-methylcytosine dioxygenase activity ; GO:0070579, which removes the methyl group from position 5 of cytosine in DNA via oxidation of the 5-methylcytosine, followed by removal of the oxidated base by the base excision repair system.
Open in VFB 3D Browser →Classification
Alternative Names
| Synonym | Scope | Reference |
|---|---|---|
| 5fC dioxygenase | narrow synonym | |
| 5-formylcytosine dioxygenase activity | narrow synonym | |
| 5hmC dioxygenase | narrow synonym | |
| N3-methylcytosine demethylase activity | narrow synonym | |
| 5-hydroxymethylcytosine dioxygenase activity | narrow synonym | |
| N1-methyladenine demethylase activity | narrow synonym | |
| 1-ethyladenine demethylase activity | narrow synonym | |
| oxidative DNA demethylase activity | broad synonym | |
| 2-oxoglutarate-dependent DNA demethylase | exact synonym | 17991826 |
References
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