rearrangement_region [SO_0001872]
A region of a chromosome, where the chromosome has undergone a large structural rearrangement that altered the genome organization. There is no longer synteny to the reference genome. NCBI definition: An orphan rearrangement between chromosomal location observed in isolation.
Note
This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewerOpen rearrangement_region in VFB
VFB Term Json
{
"term": {
"core": {
"iri": "http://purl.obolibrary.org/obo/SO_0001872",
"symbol": "",
"types": [
"Entity",
"Class"
],
"short_form": "SO_0001872",
"label": "rearrangement_region"
},
"description": [
"A region of a chromosome, where the chromosome has undergone a large structural rearrangement that altered the genome organization. There is no longer synteny to the reference genome."
],
"comment": [
"NCBI definition: An orphan rearrangement between chromosomal location observed in isolation."
]
},
"query": "Get JSON for Class",
"version": "44725ae",
"parents": [
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/SO_0001411",
"types": [
"Entity",
"Class"
],
"short_form": "SO_0001411",
"label": "biological_region"
},
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/SO_0001785",
"types": [
"Entity",
"Class"
],
"short_form": "SO_0001785",
"label": "structural_alteration"
}
],
"relationships": [],
"xrefs": [],
"anatomy_channel_image": [],
"pub_syn": [
{
"synonym": {
"scope": "has_exact_synonym",
"label": "rearrangement region",
"type": ""
},
"pub": {
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
"types": [
"Entity",
"Individual",
"pub"
],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
}
],
"def_pubs": [
{
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
"types": [
"Entity",
"Individual",
"pub"
],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
]
}
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